LOC122341827 (LOC107703344,LOC107753612,LOC101883165,LOC107592774,LOC107581787,LOC107674625,LOC107758329)


Basic Information

Item Value
gene id LOC122341827
gene name LOC107703344,LOC107753612,LOC101883165,LOC107592774,LOC107581787,LOC107674625,LOC107758329
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 16237804 ~ 16241590 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235474.1
TAGAAGGGTTCCTTTGATTAGGTGTACAACTTTTTTTCAATTAGCATAAACACTGGTGAGTGCCGCTTTAATTGCGCAGCCGCTACACCTCGGTGTGTGCGGAGCGACGAGGTGAATGAGAAAACTGCTCCCATCGCATCAGAGACACGCAGCAGCTCCGCCGCATCCGCAGACGCTCGTTTCTTCCCGTCAGCTAGAGACGAAGGAGAAGCACACTGAACCTCGCACCTGCTACCGAGCGCGCAACGTCGAGGGCTGTAAGCTAAATGATGGATTTCATTACCTTGCTGGTTTTGGCTGAAGATGAAGATGCCTTGAGCTTTAGTAATCCACTCTGGGATGTCTAAAGCAGCTTTTGGATTCTAACCAGCGCATATCAACATATCACAAATAACCCCGAACCTTTACCACAAACAGAAGGAATATGAATTTAACCGCAGGCGTTCTGAAAAAAGAGCTTCTGCTCTCAAACGCCTTGCTGTCCTTGAACGCCTCTCTCCACGGTGTCGAGGACTTTGCGAATGATGTGTTCCTCCACCAGAGTGGAGAGCTGGAGAGACTGCTGCTGCTGACGATCAAAGAGCCCACCACTATCGCTCTCACCGTGATGTACTCTTTATCGTTCGTGGTGGGCTTCATAGGAAATCTCATGGCCATTCGAATGCTCACCTGCCAGAAGAATAAGAGGATGCAGAGCATCAGTGCCACCCGGAGTTTACTCATCAACTTGGCAGTGTGTGATCTGATGGTGGTTTGCATCTGCATGCCCATCACGCTCGGCCACACCATTTACACCGCATGGGTGTACGGAGACCTCCTGTGCCGGGCCGTCCCCTTCATCCAGGCCGTGTCCGTGTCTGCAAGCGTCCTCAGCCTGACCGTCATCAGCATCAACCGGTACTACAGCGTGCACAGCCCGCTCAATTCCCTCTCGTACTTCACCCAGAAGAAGATCTACATCACCATCGTGTGCGTTTGGATCCTGTCCTCGGCCATTTGCGCACCTTTGCTCTTCATGATCAAGCTGGACGAGATCCACTTAATCGACATCGCCGTGCCAATCTGCAGAGAGCTCTGGCCGCAGGCGAGACTCAAGCAGGTCTACAACGTGCTCCTCTTCGTGGCTCTCTACTGCATCCCCGTGACCTTCAACCTCATCATCAGCTTTCTGACAGGAAGGAAGCTCTGGAGGGCTTCTCATCATTTTGACGATTTCGACCCACACAGCCAGGCCATGCACGCTTCACATCTGAAGATGCGCAAGAAGATCGCCAAGGTGGTGGTCACTTTGGTCCTCTTATTCGCCGTCTCCTGGCTCCCGCTTTACGTTGCAGACATCCTGATTGACCGCGAGATTCATCCGCCTCACTGGGTTCTGCAGAGTCGTCCTTTCGCACAGTGGCTGGGCCTCACTAACTCCAGCCTCAATCCCATCTGCTATTGCTTCTTGGGTGATTTGTACCGCTCTGCCAGAGCAGTAAGGTCCAGGTATCATCAGAGAATGCTTTCCGTCCTTAGATCCTCCAGCTCTTTTAAACTGTCCAGTGTGCTTTCTTTCAAAAGGCAGAAATCTGGCCGGCAACAAGGTGCCGTGAGCCAGGTGTCGGTGGAGACTCTTTCTGATTGGTGTTCAAACAACAGCCAAATGGTGTCTCTCCAAAGCCTGTCAGAGAAGATAGCGTCTACAAGCAATCCTAAGTTATCAAATTTATAATCAGGGTGCATAGTACCTAAAAGCATGCAGGGCACTTATAGGGTTAGTTCACAAAACAACTTTTGTTTTCTACCCAAGAAGTAGAGGTTTTATGAATCTTTTTACTTTTGGGAGAACAATCTcagatcatttattttgtagtattGTCAAAAGGCATGTGATTCTGATGATTTGATGCTACTTAGTTTGTATAGTTTGTTTTCGGAACTAACAGTCACGAAAAGTAAGTTACATTGTAACTGTAAGTTACAGTTACATTGCATCATAGCTTATATTGTACGTGAATAGAAGTTTCTTGATGTGAAGTGGGACTTCCTGTAAATAAAGGACGGTTTTGTATAGAATTCACTGACACAGATTGTACATAAATGGTCAATTAAGGCAAGGCAATTAAGACAAATGTTTGCATGTGAAAATTCAGTGcgataaatattttaatttgactgaaCAGCTGTTCGGACCAACATAAACATGCTGTCAATGTGATGGAATTTTTTTATGGGGAGATGTTCTAATCTCAGTGAAGAAACCCAGCCAACCAATGAAACCCAGACTTTTGGTCACATGCCCAGAGCAAGAGCAACTGCTGTTAGATGAAACTATTTCTTTTGTCTCTGTACTTTTTGGTGTTGTTTGATAAACATGATAGGGAATACAAAAATCTGAACAGCAGTTTGAAAATATGTCCTTTTGACTTTGAATCTTCGTGTGTCAGAAATGGAAAGTTGAGCAGTTTTGTGAACCGAAGAAACCAAGGTATTTAGGTTCTTGTCTATAAGGTCTGTCAGTGAATCTACTCTTTCCTTATGATTAACATGTTAAATACTAGTTTATATTTGTATCTTTCTGAAGAGCTTTTTTTGCCACAATTGCCTTTAACTTGAAGCCATTAAGGCATAATTAGCTGATATGTTAAGctgctataaaaatattaattgtgaaAAGATCTACTggaattgaaaatgaaaataaaaaagaattttcAGGTTATGCGTTTAACTGTGCTTTAATCCtggttaaaacagaaaatactcTTCTAGTATCTTCTAGATATTGTTCTAGATatgaagtttttgttttgcctttagtgcaatgacaatataaaatctgtttcatattctatttatctatttttcaCTATTCTGTTACACTGTTTTTCTCATATGCTGTAAATATGTCAATGTATAAATGCCATTATGTTTTAGGAAAGGGGACCCTCACAGTCGTTGTATTGGGGTCCTTGTCTTAAAAGATTTGAAAAGCGTAGTGAAAATTTGTAGTGTTTCgagtaaaatcattttttccacaatatctctataaacatataaatgtgcatttatattcacaaaaaaaaattctatttggTATAGAGTTTCCAGAGTGCATGAATACAATT

Function

NR:

description
PREDICTED: neuropeptide FF receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235474.1 True 3110 mRNA 0.43 2 16237804 16241590

Neighbor

gene id symbol gene type direction distance location
sdk1a sdk1a,LOC107703405,LOC107591833,LOC107674633 coding downstream 104646 15888140 ~ 16133158 (-)
LOC122333178 cyp3c3,LOC107703407,LOC107748444,LOC107720069,LOC107581712,LOC107703406 coding downstream 350536 15880475 ~ 15887268 (-)
LOC122333197 cyp3c4,cyp3c3,LOC107703406,LOC107581712,LOC107703407,LOC107748444,LOC107748668,LOC107720069 coding downstream 358351 15873998 ~ 15879453 (-)
foxk1 foxk1,LOC107748300,LOC107581713,LOC107720067,LOC107674632 coding downstream 365620 15857834 ~ 15872184 (-)
ap5z1 ap5z1,LOC107748036,LOC107703412,LOC107720065,LOC107674701 coding downstream 381135 15843615 ~ 15856669 (-)
grifin grifin,LOC107758328,LOC107592780,LOC107592523 coding upstream 2063 16243653 ~ 16245403 (-)
ttyh3a ttyh3a,LOC107581706,LOC107591862,LOC107703399 coding upstream 66831 16308421 ~ 16357532 (-)
nudt1 nudt1,LOC107703398,LOC107592807,LOC107758325,LOC107674605 coding upstream 127283 16368873 ~ 16372439 (-)
LOC122341848 LOC101886504,LOC101886427 coding upstream 207964 16449554 ~ 16451043 (-)
elfn1a elfn1,elfn1a,LOC107703384,LOC107674694,LOC107572165 coding upstream 300758 16542348 ~ 16629156 (-)
G20627 NA non-coding downstream 18547 16218246 ~ 16219257 (-)
G20630 NA non-coding downstream 21560 16214600 ~ 16216244 (-)
G20624 gna12,LOC107703403,LOC107758336,LOC107753491,LOC107592501,LOC107674729 non-coding downstream 29985 16205369 ~ 16207819 (-)
G20571 NA non-coding downstream 415859 15821219 ~ 15821945 (-)
G20546 NA non-coding downstream 600192 15635072 ~ 15637612 (-)
G20643 NA non-coding upstream 28094 16269684 ~ 16269908 (-)
G20645 NA non-coding upstream 30689 16272279 ~ 16272524 (-)
G20717 NA non-coding upstream 449575 16691165 ~ 16699422 (-)
G20752 NA non-coding upstream 541614 16783204 ~ 16783825 (-)
G20753 NA non-coding upstream 543400 16784990 ~ 16785208 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other downstream 637456 15598770 ~ 15600348 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other downstream 1058445 15120806 ~ 15179359 (-)
LOC122341947 NA other downstream 1092196 15141817 ~ 15145608 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 1798263 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 2033454 14202930 ~ 14204350 (-)
G20680 LOC101886504,LOC101886427 other upstream 209550 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 211484 16453074 ~ 16455479 (-)
mafk mafk,LOC107703391,LOC107674662 other upstream 474131 16715721 ~ 16729689 (-)
uncx uncx,LOC107703385,LOC107674712,LOC107568937,LOC107745590 other upstream 621135 16862725 ~ 16873987 (-)
snn snn,LOC107564698,LOC107703342 other upstream 797597 17039187 ~ 17042414 (-)

Expression


Co-expression Network