LOC122341829 (LOC107672151,LOC107583318,LOC105890774,LOC103393291,LOC107695138,LOC103147375,LOC105029658,LOC107748796,LOC102224681)


Basic Information

Item Value
gene id LOC122341829
gene name LOC107672151,LOC107583318,LOC105890774,LOC103393291,LOC107695138,LOC103147375,LOC105029658,LOC107748796,LOC102224681
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 23684853 ~ 23687289 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235476.1
GTCTCTCATACGTGCCACGCTTAAAATGGCCGTTTCAGACGGACGCCTATAGTCGACTCTGATATTGCCTGACGGTCCTGagaataataacaaacaaacgcCACTCCATTCCACCGCCTTCACGGATAAACGTTATTTGCCCGTTTCTCCGATGTTTTAGACCAAATCTGCATGTAATTTTAAGTCTATTACACGAGCAGCCGAGCAAACTCACTTGGATTCCGAAAacaagcgttcaaaaccaaacGGTTGAAAATCAAACGCTCGTTTCGGTCGCGAGGTAATTATTTTTCTCGCGCGTttggctcttttttttaaacgtttccaGTTTTTATTCTAGGGttcggttttttttttcacggaaACAGTTCGGGATTTGCTGGAAAGGCATTTTGAGCATTTATTTGAGGGTGGCGCTGTCGAGTCATGTCTGGAATTGCTTTGAGTAGACTGTCACAGGAGCGCAAAGCCTGGAGGAAAGACCATCCTTTTGGTTTTGTGGCTGTGCCGACCAAAAACCCAGATGGCACCATGAACCTCATGAACTGGGAATGTGCAATACCAGGAAAAAAGGGGACTCTTTGGGAGGGAGGATTGTACAAACTGAGAATGCTTTTCAAGGACGATTACCCATCTTCACCACCCAAGTGCAAGTTTGAGCCTCCGATCTTCCACCCAAACGTCTATCCTTCGGGTACGGTGTGTCTGTCCATACTGGAGGAAGAGAAGGATTGGAGACCAGCCATCACCATCAAACAAatactGTTGGGCATCCAGGAGCTCCTGAATGAGCCTAACATTCAGGACCCAGCGCAGGCAGAGGCCTATACGATATACTGTCAAAACAGGATGGACTACGAAAAGCGCGTGAGGGCACAGGCTAAGAGATTTGCTCCTACATAGAGAGGCACGTGTACGATCTTAATAAAGAAATTCTTCAGAGATGCCATTCTGATGCTCCAGAATCCTTCACCACTCAACGAAAACCCCCAAAACCGCAGTCGAGATTTGTTTAAGCTGGCTTCAGCACAGCACTGAACGAGAACGGGCGCGAAACAATTCTAAGATGAAAGCAACAAAGGCAGGTTAACGTTAGCCGCTGATCACCGACCAGTGTTTTGTATAGTGATGGTGAaatcttgttgttgttttttttgtttttgttttttttttgtttccgaGGAAAAAAATGGTTGGTGATCAGTTGCtaagaaacaacatttacacaGAGCAGAGCTGGTTAAGGTTTCTgtctatatatagtatacatacatatataaaattctgtacttttatttacttttttacgGTTtcattatactaaataaaataagtgtggCCATAATATATGTAATGAGTGTAtgtataatttgaaataaaatgctgaagTGAAAAACGCAGCGTCAGTTTAA

Function

NR:

description
PREDICTED: SUMO-conjugating enzyme UBC9-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0019789 SUMO transferase activity molecular_function

KEGG:

id description
K10577 UBE2I, UBC9; ubiquitin-conjugating enzyme E2 I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235476.1 True 1412 mRNA 0.43 7 23684853 23687289

Neighbor

gene id symbol gene type direction distance location
mpst mpst,zgc:162544 coding upstream 142 23682485 ~ 23684711 (+)
si:ch211-256m1.8 si:ch211-256m1.8,LOC107748794,LOC107695133,LOC107583259,LOC107723616,LOC107672154,LOC107602338 coding upstream 3841 23674032 ~ 23681012 (+)
napsa zgc:63831,LOC107695135,LOC107748792,LOC107583260,LOC107672139,LOC107723590 coding upstream 23508 23655511 ~ 23661345 (+)
st13 st13,LOC107695132,LOC107672142,LOC107602335,LOC107583261 coding upstream 40313 23636361 ~ 23644540 (+)
cbx7a LOC107695130,LOC107748788,LOC107583303,LOC107602332,LOC107672137,LOC107723608 coding upstream 97225 23582431 ~ 23587628 (+)
il2rb il2rb,LOC107583317,LOC107695139 coding downstream 8904 23696193 ~ 23705438 (+)
trnas-aga_1 NA coding downstream 148810 23836099 ~ 23836180 (+)
mchr1b mchr1b,LOC107719342,LOC107672125,LOC107672690,LOC107602308 coding downstream 185842 23873131 ~ 23877674 (+)
LOC122342045 mfsd6l,LOC107719337,LOC107583315,LOC107728393,LOC107563357,LOC107703882 coding downstream 364633 24051922 ~ 24056391 (+)
zgc:171844 zgc:171844,LOC107672688,LOC107719339,LOC107583313,LOC107703875 coding downstream 371404 24058693 ~ 24071844 (+)
G22800 NA non-coding upstream 11863 23667905 ~ 23672990 (+)
G22758 NA non-coding upstream 38687 23578476 ~ 23646166 (+)
G22757 NA non-coding upstream 106612 23574898 ~ 23578241 (+)
G22754 NA non-coding upstream 121607 23563040 ~ 23563246 (+)
LOC122341920 LOC107672134,LOC107602299 non-coding upstream 269944 23412813 ~ 23414909 (+)
G22802 NA non-coding downstream 67233 23754522 ~ 23755997 (+)
G22816 smurf2,LOC106937021,LOC107104615,LOC106934056 non-coding downstream 71454 23758743 ~ 23759342 (+)
G22833 NA non-coding downstream 114887 23802176 ~ 23805489 (+)
G22857 NA non-coding downstream 183506 23870795 ~ 23871177 (+)
G22863 NA non-coding downstream 198953 23886242 ~ 23886606 (+)
zmp:0000000912 LOC107748810,LOC107695116,LOC107583322,LOC107695109,LOC107583307,LOC107709636,LOC107672113,LOC107602301 other upstream 253087 23424621 ~ 23431766 (+)
LOC122341907 NA other upstream 276039 23403441 ~ 23408814 (+)
LOC122341898 LOC107662363 other upstream 322911 23343964 ~ 23361942 (+)
dnal4a dnal4a,dnal4,LOC107662365,LOC107585028,LOC107690743,LOC107740666,LOC107710037 other upstream 341213 23338379 ~ 23343640 (+)
prr15la prr15la,LOC107710040,LOC107585086,LOC107662431,LOC107582938,LOC108412372 other upstream 521137 23158219 ~ 23163716 (+)
c1qtnf6a c1qtnf6,c1qtnf6a,mgat3a,LOC107695119,LOC107723613,LOC107672153,LOC107583300,LOC107748818,LOC107580620,LOC107695120 other downstream 22214 23709503 ~ 23721719 (+)
LOC122342055 pik3r6,LOC107719336,LOC107703883,LOC107563351,LOC107728708,LOC107583295 other downstream 352613 24039902 ~ 24051913 (+)
G22958 NA other downstream 407735 24095024 ~ 24097159 (+)
G22996 LOC107703883,LOC107563351,LOC107719336,LOC107583295 other downstream 746766 24434055 ~ 24439463 (+)
G22953 mfsd6l,LOC107719337,LOC107583315,LOC107563357,LOC107728393,LOC107703882 other downstream 759589 24446878 ~ 24449289 (+)

Expression


Co-expression Network