LOC122341832


Basic Information

Item Value
gene id LOC122341832
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 4892115 ~ 4894607 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235479.1
tgaatgcattaaaatgtctaaaCCCAAATTCCTAATCAGAATCACCCAAACTCTTTGTGACTTACTTAATATCGCATGAACTATGGAATGCAAGCAGGATTAGTCTCATGCATGTATCTGTGCATTGTGTCACCTTTTAGGGGGGCTGATGACAGCTAGACTGTTTTGGAAAGAGGAAGGACCATCGTGTGCAGGTTTAATCATCTTATGATGCTCAGAACTATAAAAGAGCTGATAGGGGAGTGTGTGTTGACAGAGAGTCGCATCCTGACCACCTCAACAAAGCATcgagacagaaacagaagacCAGCAGATCCTTATCGTTTCACTGCTATCGGTCTTATGGATATCTCCAAGAATAGGGATGTCTCCAAGCCTAAAGCGAGCAGCAAGGTTGCCACGCGAGCCCCGGCGCCTGGCAGTCCCCACAAGGGCCCACCCAAGTTCAAACAGAGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCAatcatatttttctctctcacagacTTTAATGTGATCTGTCCGTGGGAGGCGTACAGTCACCTGGAGTTACATGAGCTGGCCCAATACGGCATTATTTGAGGTCACTTCCTGTTCCCACATCCCACTGAACAACATCCTGCACCTTAACatgtcttttaaataataatattcacacAGCAATATCTTTGGTTGATGTTCGGTTAGTTACGCAGAGACAACTTTTACCAGCAGTTATCAGTCATCAATAACAAAACGGACGTTAGTTAATCTACCTCTTCAAACTGAAATTTCATGCAGAACTAGATTCATTTCACTCTATCGCCAATtctaatttcagatttttactgtattgttgtACGTGttatagaattttaatattgacATGCAATTGACATTTTAGGTGTCAGCTTTTATTTCCATACGATCCTGAAAAAAACATAGCATGGTAGCGTgagtttctcttttcttttctttctttttttgaaatagtttttcattttgtcaAGTTGCAAATGTCCAAAATGAGTTTGGACACCGCGGGGTCTCAGTGTTTGCCCATAGCGCGAGTACTGGGAGCAGCTCTCTGTGAGAGCTCGGCCCAGTTTATTGGCCTTATGACGCTGGAGAGCCGTGCAAGAGTGAGTGCGGCTCATACCTGGGAGAGCAGAAAAGATTTGGACATAAAATAAAGTCTGATTGTTTTCATACTTTCAGTCTATCTGAGTAGTTTCTGAACCTCTGAAACATTATGCAGTCTGTAAAGCAAGATGGTTTACATAGGCCTTCAGGATTTTCAGCCAATCAAAACACTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235479.1 True 1310 mRNA 0.41 3 4892115 4894607

Neighbor

gene id symbol gene type direction distance location
LOC122341768 coa1,LOC107600219,LOC108428892 coding upstream 61634 4827437 ~ 4830481 (+)
wdr48b wdr48b,LOC107757819,LOC107662983,LOC107600221,LOC107713656 coding upstream 71459 4812939 ~ 4820656 (+)
LOC122332276 urgcp,LOC107662982 coding upstream 79646 4800795 ~ 4812469 (+)
LOC122334471 NA coding upstream 92965 4795442 ~ 4799150 (+)
sema4e LOC107698504,LOC107757804,LOC107662986,LOC107713625,LOC107599253 coding upstream 104366 4773535 ~ 4787749 (+)
LOC122341982 zgc:112320,pde6g,LOC107718621,LOC107660259,LOC107661785,LOC107553649 coding downstream 13744 4908351 ~ 4936740 (+)
si:dkey-282h22.5 NA coding downstream 57894 4952501 ~ 4957859 (+)
antkmt fam173a,LOC107553674 coding downstream 63405 4958012 ~ 4961980 (+)
xpo6 xpo6,LOC107715628,LOC107718574 coding downstream 68954 4963561 ~ 4983738 (+)
nme4 nme4,LOC107715653,LOC107695718,LOC107718576,LOC107661657,LOC107553633 coding downstream 92833 4987440 ~ 4991394 (+)
G17018 LOC107715650,LOC107550229 non-coding upstream 24797 4865208 ~ 4867318 (+)
G17003 NA non-coding upstream 98081 4792546 ~ 4794034 (+)
G16991 NA non-coding upstream 237861 4604054 ~ 4654254 (+)
G16990 NA non-coding upstream 241477 4602024 ~ 4650638 (+)
LOC122341099 NA non-coding upstream 242944 4647091 ~ 4649171 (+)
LOC122333539 NA non-coding downstream 4232 4898839 ~ 4903279 (+)
LOC122341984 NA non-coding downstream 18087 4912694 ~ 4914493 (+)
G17026 NA non-coding downstream 97389 4991996 ~ 5035379 (+)
LOC122341773 NA non-coding downstream 312637 5207244 ~ 5211693 (+)
G17059 NA non-coding downstream 314049 5208656 ~ 5208867 (+)
G16978 LOC107601574,LOC107654242,LOC107715645 other upstream 345548 4470732 ~ 4546567 (+)
G16979 NA other upstream 429841 4458698 ~ 4462274 (+)
G16955 crebbp,LOC108440697 other upstream 453914 4437288 ~ 4438201 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other upstream 486731 4357032 ~ 4405384 (+)
G16672 NA other upstream 858589 3969515 ~ 4033526 (+)
G16981 NA other downstream 11049 4905656 ~ 4906966 (+)
elof1 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058,LOC103384163 other downstream 415886 5310493 ~ 5312371 (+)
nfil3-2 nfil3-2,LOC107659565,LOC107550255,LOC107711126,LOC107718587,LOC107563256,LOC107656794 other downstream 521151 5415758 ~ 5480607 (+)
LOC122331163 LOC107653472,LOC107718593,LOC107563253 other downstream 662401 5557008 ~ 5565974 (+)
G17302 NA other downstream 702492 5597099 ~ 5598232 (+)

Expression


Co-expression Network