stxbp2 (stxbp2,LOC107711254,LOC107587946,LOC107672507,LOC107670524,LOC107757364,LOC107563326)


Basic Information

Item Value
gene id stxbp2
gene name stxbp2,LOC107711254,LOC107587946,LOC107672507,LOC107670524,LOC107757364,LOC107563326
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9189136 ~ 9199702 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235488.1
attttatcTTCCGGGTTTTGTTGTCCGTCAGGGCGTGGAGGAGTTCGAGTCATTTCTGTCTTCACAGGCCTACTTGCAGGAACCTGTCAACAGGGAAGTGTCAAGATGGCCCCGAGTGGACTCAAAGCGATCGTAAACGACAAAATCCTCAGCGGTGTCATCAAGAGCGTGAGGAAAGATGGGGAATGGAAGgtgcTCATCGTGGATCACATCAGTATGCGCATTCTGTCCTCCTGCTGTAAAATGTCAGACATCATGGCAGAAGGCATTACGATTGTAGAAGACATTAACAAGCGAAGGGAGCCGATCCCTAGTCTGGAAGCCATTTACCTCATCTCCCCTGCGCCAAATTCGATTCAATCTCTAATTGGTGATTTCAAAGATGCGGCCTTTACGTACAAAGCAGCGCACATCTTCTTCACAGACACTTGTTCTGATGGGCTTTTTGCTGAGCTCGGGAGGTCAAGGGTCGCCAAGGCCATCAAAACCCTGAAGGAAATCAACGTGGCTTTCATACCGTATGAGTCGCAGGTGTTTACCCTGGACAACCCTGCTTCCTTCCACACTTTCTACAGCCCGACTCAGACTAATCTAGATGAAAGGACCAGGATGATGGAGGCCATGGCTGAGCAGATCGCCACTCTCTGTGACACTCTGAAGGAATACCCAGCCATCCGCTACCGCCAGGGCCCAAAGGAGAATTTCACTCTGGCTGAGATGGTGATGGACCGTCTGAATGCACATAAAGCAGACAATCCCAGTATGGGAGAGGGTACGGATAAAGCTCGATCCCAGCTGCTTATAGTGGACCGTGGATATGATCCCATCTCTCCAATCCTGCATGAGCTGACCTTTCAGGCTATGGCCTACGATCTCCTAGACATCGAACACGACATCTACAGGTATCAGACGACCGGGATCGGAGAGGCTCGAGAGAAGGAAGTGTTGCTGGACGAGGACGATGAGCTGTGGGTGCAGCTGCGGCACATGCACATAGCGGACGTCACCAAGAAAGTGACGGAGCTCCTGCGCACCTTCTGTGAGAGCAAGAGGATGAACACGGACAAGGCCAACATTAAGGATCTGTCTCAGATGCTGAAGAAGATGCCTCAGTACCAGAAAGAACTAAGCCTGTACTCCACCCACCTGAACCTCGCTGATGCCTGCATGAAGAAGTTCAAGAGCTCATTGGACAAGCTTTGTGAGGTGGAGCAGGACTTGGCCATGGGATCAGACGCTGAGGGGGAACAGATCAAAGACGCTATGAAGAGCATCGTTCCCGTTCTCCTCAACACCGAGATCCAACCCTACGACAAAATCCGCATCATACTGCTATACATTTTCCATAAGAAGAAGGGCGTCGGAGAGGAGAACCTCACAAAACTCATCCAGCACGCGAACGTGCAGCAGGACAAGAACATCATCACCAGCCTGCAGCACCTGGGCTGCCCCATCATTACTGGGGGCGCCAATGCAGGTAAGACTCTGCCTGACAGGAAGGAGCGCACAGAATCTACGTATCAGCTGTCCCGGTGGACACCCACCCTTAAAGATGTGATGGAGAATATCATCGATGACAAGTGTGACAGGAAGCAGTGGCCGTTCCTGTCTGATCCCGCCCCCGTCACCACCACGAGCACCACAGTCAGCAGCGCGCGCTTTGGACACTGGCACAAGAACAAGTCTGCCACAGAGTACCGCAGCGGCCCGCGCCTCATCATCTTTGTGATTGGTGGCGTGACTCATTCGGAGATGCGCTGCGCTTATGAAGTGACCCGGGCCACCGAGGGCAAATGGGAGGTTCTGATCGGATCGTCTCACATTCTTACTCCAACCAACTTTCTGAATGATCTGAAGAATTTGGAGCAGCCTGCAGCCGTTTAGCAGTACATCACTGAAGAGATCGATCCCACTGAACTCATGTGAAAGCTGATAAGCTGAAATAGTGATTCTCTCAAATGACTAGTAAAAGGACACATTTTAGATCTTACTTGTTGATTATTGGCAGTTTTAAAGTAGTAATTTTAATTACCCAACTTAAACTggtgatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatgtatattaaagcTGTTGAagattgtttaatttaaaagaaaaatatatatgtgtatgacaatgtatgtaaaaaattatttgaggACTTGTTGCCAAAAGCCTATAATTGTTCAGATAAATGGATTTTcattgaaatcatttaaatattagtcCTTTCAAGTTCTGCTGTGATTTGAAGACCTCTTTAGACTGGAACAAATGATCACACTGGATTTCTGGTTTAATCGTACTGTGCTGTAAAGCTGCACAATGTagaaacaaactattttttttatttgtttgcttataCTACAAAGCAAGATGAGCACGCTTATAGTACAATAGCCTATTTTTGATTACCAGTCtgggttttgttatattttctgCCACTGTGTTGGTGAGGGCATCAGTTGTTTCATCTCAgtatagatgtttttttattattattcatgctCTGAACTTGTGCACTTTCTTCTTTTACTGTTACGTTATCACATATAGGTGGATCTGGTTCACTGggaatttttgtttgttgtctatgttaatgattataaataaattttgctTATGCCTCTCTCTGGAAAAAA

Function

symbol description
stxbp2 Predicted to enable syntaxin-1 binding activity and syntaxin-3 binding activity. Predicted to be involved in intracellular protein transport; neurotransmitter secretion; and vesicle docking involved in exocytosis. Predicted to act upstream of or within protein transport. Predicted to be active in plasma membrane and secretory granule. Is expressed in brain; epidermis; liver; periderm; and sensory system. Human ortholog(s) of this gene implicated in familial hemophagocytic lymphohistiocytosis 5. Orthologous to human STXBP2 (syntaxin binding protein 2).

NR:

description
syntaxin-binding protein 2-like isoform X2

GO:

id name namespace
GO:0006904 vesicle docking involved in exocytosis biological_process

KEGG:

id description
K15300 STXBP2, MUNC18-2; syntaxin-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235488.1 True 2653 mRNA 0.46 19 9189136 9199702

Neighbor

gene id symbol gene type direction distance location
pbx4 pbx4,LOC103392870,LOC102788435 coding upstream 61402 9093815 ~ 9127734 (+)
LOC122332643 LOC107670450,LOC107672442,LOC107711182,LOC107757351,LOC107567228 coding upstream 99461 9084364 ~ 9089675 (+)
atp13a1 atp13a1,LOC107711248,LOC107672485,LOC107757369,LOC107670516 coding upstream 105661 9067646 ~ 9083475 (+)
lmx1al lmx1al,LOC107672514,LOC107670451,LOC108429662,LOC108256788,LOC107567229 coding upstream 124989 9043438 ~ 9064147 (+)
LOC122341294 gmip,LOC107672475,LOC107670530,LOC107587992,LOC107711163,LOC107757342 coding upstream 147603 9024378 ~ 9041533 (+)
LOC122341842 LOC107588008 coding downstream 3129 9202831 ~ 9206354 (+)
xab2 xab2,LOC107672506,LOC107670481 coding downstream 6952 9206654 ~ 9212934 (+)
camsap3 LOC107711256,LOC107672468,LOC107587945,LOC107670479,LOC107757361 coding downstream 14542 9214244 ~ 9245657 (+)
zmp:0000001048 zmp:0000001048,LOC107711259,LOC107670472,LOC107563320 coding downstream 61203 9260905 ~ 9267730 (+)
col5a3a col5a3a,LOC107672483,LOC107711265,LOC107563316,LOC107757338,LOC107670510,LOC107587984 coding downstream 153996 9353698 ~ 9400810 (+)
G18261 hs3st2,LOC107550309,LOC107703334,LOC107741797,LOC107574133,LOC107674621 non-coding upstream 307014 8881198 ~ 8882122 (+)
G18092 NA non-coding upstream 513250 8671661 ~ 8675886 (+)
G18055 NA non-coding upstream 698719 8474293 ~ 8490417 (+)
LOC122331402 NA non-coding upstream 874646 8312389 ~ 8314490 (+)
G18025 fam234b,LOC107576065 non-coding upstream 972105 8216524 ~ 8217031 (+)
G18303 NA non-coding downstream 50397 9250099 ~ 9250630 (+)
G18305 NA non-coding downstream 62268 9261970 ~ 9262239 (+)
G18425 LOC105357980 non-coding downstream 213942 9413644 ~ 9414007 (+)
G18429 NA non-coding downstream 284733 9484435 ~ 9484736 (+)
G18443 NA non-coding downstream 341998 9541700 ~ 9543366 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 3476 9184399 ~ 9185660 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other upstream 5846 9138467 ~ 9183290 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other upstream 176958 9010050 ~ 9012178 (+)
LOC122341292 LOC107729471,LOC107687638 other upstream 200326 8980591 ~ 8988810 (+)
G18048 NA other upstream 446834 8513349 ~ 8742302 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other downstream 493247 9692949 ~ 9697915 (+)
G18491 NA other downstream 540094 9739796 ~ 9749880 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other downstream 599113 9798815 ~ 9799796 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other downstream 826116 10025818 ~ 10103461 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 1492188 10691890 ~ 10698540 (+)

Expression


Co-expression Network