strada (strada,LOC107693497,LOC107658471,LOC107548327,LOC107730762)


Basic Information

Item Value
gene id strada
gene name strada,LOC107693497,LOC107658471,LOC107548327,LOC107730762
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 11740279 ~ 11749928 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235535.1
TCACCAAACGTTCCTTAACACACGACCCAGCCCACCGCGAGACGAGAAGAAGAAACGCGTTACATCCTGCAGTTTTGGCAATAGCTGGAAATTTGACGGTACTTAGAAGTAAGAGCCGTACAATTTAGTAGCAGAGGATCTGTActctttatgtgtttttgaaagtatTGCTACCTGTCATCAGCATCCCCAGGATCCATGTCTTTTTTGCGCTGGGTGTCAGAGAAACTCAGTGTGGAAAGCCTGAGGGATCTGGAGTTATTTGGAGAGCAAACTCAGGCAAGCCCACTAAGAAAAAGCTTTGCAGTGGCTGGGATTTATCAGTGTATGCGCAATAAAAACCCTTCCCCTCTTCAAAATCAGGCCCATGAGGACAGTCAAGAGTCTCTGAGCCCTCTCCCACGCAGAGACACCATGGGAAGCTTCCTTCCAGACAACAGCGCCTATGAGCTGCACGCTGTCATAGGTCGAGGTTTGGAGGACTTGATGACAGTGAATCTGGCCAGTTACAAACCCACAGGAGAGTATGTGGCCATCCGCCGCATTGACCTGGATTCCTGTACCAATGACATGGTCAGTTACTTACAGGGAGAGCTGCATGTGTCTAAGCTGTTCCACCACCCCTGTATCCTCCCCTACAAGAGCGTCTTCATCACAGAGAATGAGCTGTGGGTGATCACACCCTTCATGGCCTATGGATCTGCGCGAGACTTGATCAGCACACATTTTACTGACGGTTTGATTGAGCAGACAATAGCCTACATCCTGCTGGGGGTGCTGAGAGCGCTGGAGTACATACATCAGATGGGCTACGTTCACCGTAGTGTGAAGGCAAGCCACATCCTGATTGCAGCAGATGGACAGGTGTATCTGTCCGGTCTCAGGAGCATCTTCAGCTTGATCCGTCACGGGCAGAGAGCACGTGTTGTACACGATTTTCCCCAGTACAGTGTTAAAGTACTACCTTGGCTCAGTCCAGAGGTTCTGCAGCAGAATCTTCAGGGATATGACTTCCGCTCAGACATTTACAGTTTGGGCATCACTGCATGTGAGCTAGCTAATGGACACGTGCCCTTTAAAGACATGCCTGCTACGCAGATGTTGTTAGAGAAGTTGAACGGCACAGTCCCCTGCCTGCTGGACACGACCACCATCCCCCCTGAAGAACTGAGCATGAAACCGTCTCGCTCCGGGGCCGACTCTGGGATCTGCGAGGGCCCCGGCGCCGGAGGAGCTCGCCACACTAACGGAGAGCCCTCATCGTCTTCTGGAGGAAACCCCTACAGCCGAACATTCAGTCCTCACTTTCATGCCTTTGTGGAACTTTGTCTACAAAGAGATCCTGAGAAAAGACCCTCTGCCAGCTCTCTGATAGGCCATTCCTTCTTCAAGCAGATAAAGCGCAGACCATCCGAGGCTCTTCCTGAGCTCCTGCGTCCAGTTTCTCCAATCAGCAGCCTAGATGGCATGCAGCCTCAGGATTCACCCACTGGATTGGCCAGTCTGGAGTCTGATCTCAGCCAGCTGGATGTGGATGACTGGGACTTTTGACATGAAACGGATGAGAAGTGAAGGAACGATGGCTGGAACTGAAAGGGAGGCGTTACCATAGGACTCTTAACGAgaattgattgtttttgttgtgttttaaaaggGAGAAAAAGGGAAGGCCAGTGCTAAGTGAATGTGatatagacattttaaagagCTTCTAAGATGTTACAAGAGACTCTGGAACGTTTCTTGTTGTCTTTTGTGATTTGTGCACATCACTGAAACTACAAGGACAGActataaaaagagaaatgaaaaaccAGCAGCCGCCATAGCCTTGATAATGCTTTCAGAAGCATGAACTGAAGCCTGAGGCATGCACTGCGCACTCTTACCGACTGGCCATGTGACAGTGGTGATCACTTGAGGCCACCGAAGCCTGTTCCGTTTCACCTGAACTAATGACACTCTATGAATGTCTTAAAACTTAAGCAAAACAGGTTCACAGCTGAACTCTCACGGCTCCTAGCATATTTTCCAATGAAGCATAAAGAGCTTTCAGTAAAGTCAAACTAAACATAGAACTGTTCAGTTTATGGGTGGATTGTGGAGATTTGAAAGAACCAAGCTTCTTCCCTCAGCACAAATGTTGACGCCACCAGAAATATGCTAGAGGGGAAGATTTAGTTTTTGCCTGTTATCTGGTGTagttattagttttatattagCTGCATTTCTGATGAGATTCATTTTTGTTCTTGGCATGCTTTACAGGAGGAAGTACTTCAGTGGACcttttgtgtattttcagcatatttACCTCTTGGTCAAATGGAATAAATGTTGCAACTGCACAAATGTCAA
>XM_043235536.1
TCACCAAACGTTCCTTAACACACGACCCAGCCCACCGCGAGACGAGAAGAAGAAACGCGTTACATCCTGCAGTTTTGGCAATAGCTGGAAATTTGACGGTACTTAGAAGTAAGAGCCGTACAATTTAGTAGCAGAGGATCTGTActctttatgtgtttttgaaagtatTGCTACCTGTCATCAGCATCCCCAGGATCCATGTCTTTTTTGCGCTGGGTGTCAGAGAAACTCAGTGTGGAAAGCCTGAGGGATCTGGAGTTATTTGGAGAGCAAACTCAGGCAAGCCCACTAAGAAAAGCCCATGAGGACAGTCAAGAGTCTCTGAGCCCTCTCCCACGCAGAGACACCATGGGAAGCTTCCTTCCAGACAACAGCGCCTATGAGCTGCACGCTGTCATAGGTCGAGGTTTGGAGGACTTGATGACAGTGAATCTGGCCAGTTACAAACCCACAGGAGAGTATGTGGCCATCCGCCGCATTGACCTGGATTCCTGTACCAATGACATGGTCAGTTACTTACAGGGAGAGCTGCATGTGTCTAAGCTGTTCCACCACCCCTGTATCCTCCCCTACAAGAGCGTCTTCATCACAGAGAATGAGCTGTGGGTGATCACACCCTTCATGGCCTATGGATCTGCGCGAGACTTGATCAGCACACATTTTACTGACGGTTTGATTGAGCAGACAATAGCCTACATCCTGCTGGGGGTGCTGAGAGCGCTGGAGTACATACATCAGATGGGCTACGTTCACCGTAGTGTGAAGGCAAGCCACATCCTGATTGCAGCAGATGGACAGGTGTATCTGTCCGGTCTCAGGAGCATCTTCAGCTTGATCCGTCACGGGCAGAGAGCACGTGTTGTACACGATTTTCCCCAGTACAGTGTTAAAGTACTACCTTGGCTCAGTCCAGAGGTTCTGCAGCAGAATCTTCAGGGATATGACTTCCGCTCAGACATTTACAGTTTGGGCATCACTGCATGTGAGCTAGCTAATGGACACGTGCCCTTTAAAGACATGCCTGCTACGCAGATGTTGTTAGAGAAGTTGAACGGCACAGTCCCCTGCCTGCTGGACACGACCACCATCCCCCCTGAAGAACTGAGCATGAAACCGTCTCGCTCCGGGGCCGACTCTGGGATCTGCGAGGGCCCCGGCGCCGGAGGAGCTCGCCACACTAACGGAGAGCCCTCATCGTCTTCTGGAGGAAACCCCTACAGCCGAACATTCAGTCCTCACTTTCATGCCTTTGTGGAACTTTGTCTACAAAGAGATCCTGAGAAAAGACCCTCTGCCAGCTCTCTGATAGGCCATTCCTTCTTCAAGCAGATAAAGCGCAGACCATCCGAGGCTCTTCCTGAGCTCCTGCGTCCAGTTTCTCCAATCAGCAGCCTAGATGGCATGCAGCCTCAGGATTCACCCACTGGATTGGCCAGTCTGGAGTCTGATCTCAGCCAGCTGGATGTGGATGACTGGGACTTTTGACATGAAACGGATGAGAAGTGAAGGAACGATGGCTGGAACTGAAAGGGAGGCGTTACCATAGGACTCTTAACGAgaattgattgtttttgttgtgttttaaaaggGAGAAAAAGGGAAGGCCAGTGCTAAGTGAATGTGatatagacattttaaagagCTTCTAAGATGTTACAAGAGACTCTGGAACGTTTCTTGTTGTCTTTTGTGATTTGTGCACATCACTGAAACTACAAGGACAGActataaaaagagaaatgaaaaaccAGCAGCCGCCATAGCCTTGATAATGCTTTCAGAAGCATGAACTGAAGCCTGAGGCATGCACTGCGCACTCTTACCGACTGGCCATGTGACAGTGGTGATCACTTGAGGCCACCGAAGCCTGTTCCGTTTCACCTGAACTAATGACACTCTATGAATGTCTTAAAACTTAAGCAAAACAGGTTCACAGCTGAACTCTCACGGCTCCTAGCATATTTTCCAATGAAGCATAAAGAGCTTTCAGTAAAGTCAAACTAAACATAGAACTGTTCAGTTTATGGGTGGATTGTGGAGATTTGAAAGAACCAAGCTTCTTCCCTCAGCACAAATGTTGACGCCACCAGAAATATGCTAGAGGGGAAGATTTAGTTTTTGCCTGTTATCTGGTGTagttattagttttatattagCTGCATTTCTGATGAGATTCATTTTTGTTCTTGGCATGCTTTACAGGAGGAAGTACTTCAGTGGACcttttgtgtattttcagcatatttACCTCTTGGTCAAATGGAATAAATGTTGCAACTGCACAAATGTCAA
>XM_043235537.1
GATCTGTActctttatgtgtttttgaaagtatTGCTACCTGTCATCAGCATCCCCAGGATCCATGTCTTTTTTGCGCTGGGTGTCAGAGAAACTCAGTGTGGAAAGCCTGAGGGATCTGGAGTTATTTGGAGGCCCATGAGGACAGTCAAGAGTCTCTGAGCCCTCTCCCACGCAGAGACACCATGGGAAGCTTCCTTCCAGACAACAGCGCCTATGAGCTGCACGCTGTCATAGGTCGAGGTTTGGAGGACTTGATGACAGTGAATCTGGCCAGTTACAAACCCACAGGAGAGTATGTGGCCATCCGCCGCATTGACCTGGATTCCTGTACCAATGACATGGTCAGTTACTTACAGGGAGAGCTGCATGTGTCTAAGCTGTTCCACCACCCCTGTATCCTCCCCTACAAGAGCGTCTTCATCACAGAGAATGAGCTGTGGGTGATCACACCCTTCATGGCCTATGGATCTGCGCGAGACTTGATCAGCACACATTTTACTGACGGTTTGATTGAGCAGACAATAGCCTACATCCTGCTGGGGGTGCTGAGAGCGCTGGAGTACATACATCAGATGGGCTACGTTCACCGTAGTGTGAAGGCAAGCCACATCCTGATTGCAGCAGATGGACAGGTGTATCTGTCCGGTCTCAGGAGCATCTTCAGCTTGATCCGTCACGGGCAGAGAGCACGTGTTGTACACGATTTTCCCCAGTACAGTGTTAAAGTACTACCTTGGCTCAGTCCAGAGGTTCTGCAGCAGAATCTTCAGGGATATGACTTCCGCTCAGACATTTACAGTTTGGGCATCACTGCATGTGAGCTAGCTAATGGACACGTGCCCTTTAAAGACATGCCTGCTACGCAGATGTTGTTAGAGAAGTTGAACGGCACAGTCCCCTGCCTGCTGGACACGACCACCATCCCCCCTGAAGAACTGAGCATGAAACCGTCTCGCTCCGGGGCCGACTCTGGGATCTGCGAGGGCCCCGGCGCCGGAGGAGCTCGCCACACTAACGGAGAGCCCTCATCGTCTTCTGGAGGAAACCCCTACAGCCGAACATTCAGTCCTCACTTTCATGCCTTTGTGGAACTTTGTCTACAAAGAGATCCTGAGAAAAGACCCTCTGCCAGCTCTCTGATAGGCCATTCCTTCTTCAAGCAGATAAAGCGCAGACCATCCGAGGCTCTTCCTGAGCTCCTGCGTCCAGTTTCTCCAATCAGCAGCCTAGATGGCATGCAGCCTCAGGATTCACCCACTGGATTGGCCAGTCTGGAGTCTGATCTCAGCCAGCTGGATGTGGATGACTGGGACTTTTGACATGAAACGGATGAGAAGTGAAGGAACGATGGCTGGAACTGAAAGGGAGGCGTTACCATAGGACTCTTAACGAgaattgattgtttttgttgtgttttaaaaggGAGAAAAAGGGAAGGCCAGTGCTAAGTGAATGTGatatagacattttaaagagCTTCTAAGATGTTACAAGAGACTCTGGAACGTTTCTTGTTGTCTTTTGTGATTTGTGCACATCACTGAAACTACAAGGACAGActataaaaagagaaatgaaaaaccAGCAGCCGCCATAGCCTTGATAATGCTTTCAGAAGCATGAACTGAAGCCTGAGGCATGCACTGCGCACTCTTACCGACTGGCCATGTGACAGTGGTGATCACTTGAGGCCACCGAAGCCTGTTCCGTTTCACCTGAACTAATGACACTCTATGAATGTCTTAAAACTTAAGCAAAACAGGTTCACAGCTGAACTCTCACGGCTCCTAGCATATTTTCCAATGAAGCATAAAGAGCTTTCAGTAAAGTCAAACTAAACATAGAACTGTTCAGTTTATGGGTGGATTGTGGAGATTTGAAAGAACCAAGCTTCTTCCCTCAGCACAAATGTTGACGCCACCAGAAATATGCTAGAGGGGAAGATTTAGTTTTTGCCTGTTATCTGGTGTagttattagttttatattagCTGCATTTCTGATGAGATTCATTTTTGTTCTTGGCATGCTTTACAGGAGGAAGTACTTCAGTGGACcttttgtgtattttcagcatatttACCTCTTGGTCAAATGGAATAAATGTTGCAACTGCACAAATGTCAA

Function

symbol description
strada Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human STRADA (STE20 related adaptor alpha).

NR:

description
PREDICTED: STE20-related kinase adapter protein alpha isoform X3

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K08271 STRADA, LYK5; STE20-related kinase adapter protein alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235535.1 True 2358 mRNA 0.48 14 11740279 11749928
XM_043235536.1 False 2292 mRNA 0.48 13 11740279 11749928
XM_043235537.1 False 2127 mRNA 0.48 11 11740811 11749928

Neighbor

gene id symbol gene type direction distance location
dcaf7 dcaf7,LOC105030232,LOC105898766,LOC100702343 coding upstream 94836 11640702 ~ 11645443 (+)
mylk5 LOC107583040,LOC107729567,LOC107658462 coding upstream 110997 11616195 ~ 11629282 (+)
fzd2 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC107721960,LOC107564008,LOC107674136 coding upstream 134102 11603674 ~ 11606177 (+)
ccdc43 LOC107674137,LOC107729438,LOC107583050,LOC107658459,LOC107721961,LOC107564021 coding upstream 146111 11591600 ~ 11594168 (+)
LOC122341817 c1ql1,LOC107729572,LOC107658458,LOC107583048,LOC107674128,LOC103367899,LOC101070426,LOC104923905 coding upstream 225120 11497653 ~ 11515159 (+)
snrnp70 LOC107729450,LOC107693498,LOC107658470,LOC107730757,LOC107548330,LOC107583035 coding downstream 4320 11754248 ~ 11762534 (+)
lin7b lin7b,LOC107730776,LOC107548331,LOC107693502,LOC107658474 coding downstream 12744 11762672 ~ 11767501 (+)
zgc:193811 LOC107693501,LOC107548311,LOC107583087,LOC107729427 coding downstream 17960 11767888 ~ 11772504 (+)
aldh16a1 aldh16a1,LOC107693504,LOC107730774,LOC107658477,LOC107583027,LOC107729490 coding downstream 94238 11844166 ~ 11852179 (+)
LOC122333949 zgc:92066,LOC107693508,LOC107730763,LOC107548336,LOC107658480,LOC107583030,LOC107693507,LOC107730746,LOC107548335 coding downstream 103834 11853762 ~ 11855061 (+)
G19184 NA non-coding upstream 20700 11712609 ~ 11719579 (+)
G19126 NA non-coding upstream 298941 11440506 ~ 11441338 (+)
G19123 NA non-coding upstream 303082 11436944 ~ 11437197 (+)
G18946 smg1,LOC107729485,LOC107583093,LOC107658410,LOC107732845 non-coding upstream 359489 11380273 ~ 11380790 (+)
G18982 NA non-coding upstream 364878 11371502 ~ 11375401 (+)
LOC122338225 NA non-coding downstream 84844 11834772 ~ 11835253 (+)
G19208 NA non-coding downstream 217720 11967648 ~ 11974006 (+)
G19255 NA non-coding downstream 322791 12072719 ~ 12073073 (+)
G19257 NA non-coding downstream 324303 12074231 ~ 12074503 (+)
G19263 NA non-coding downstream 368610 12118538 ~ 12118775 (+)
G18949 NA other upstream 370527 11368893 ~ 11369752 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other upstream 404454 11333741 ~ 11335825 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other upstream 897772 10752759 ~ 10842507 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other upstream 1041739 10691890 ~ 10698540 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other upstream 1636818 10025818 ~ 10103461 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other downstream 23272 11773200 ~ 11833924 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other downstream 135727 11885655 ~ 11893656 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other downstream 277221 12027149 ~ 12049422 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other downstream 342675 12092603 ~ 12100852 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other downstream 364120 12114048 ~ 12117939 (+)

Expression


Co-expression Network