icam5


Basic Information

Item Value
gene id icam5
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9563751 ~ 9569327 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235552.1
TATTGCTTCACGCATGAGGTTTTCTTCCTACTGCGAGTTAAGACAGGATTTCCTGTTGTCAGACTCTTAGAGACTTCACGCCATGCTTATCACAATTAAGAGAAAATAAATCCTTTTCACATACAACACCAAAGGAGAGACTGCATCTTTGCATCTATCATCGATCTCAGGCATAACCAGCATCACTGCTTATCATTTGTTTGACAATGCTCCTGCTTCAGCCGTTGATAGGTCTCTTCTTGATGAGCCATGGTGACGCCTGCGAGATTTTGTTCAGCCCTTTTGATGTTGTGGTTGAATATGGAGCTTCATTTTCGGTGAACTGCTCCTCCAGCAACACCACACATCAGACTGGCTTTAGATGGGGATTTGACGACACAGTTGTGAACAGTGAAGGTATCTCAGCAACTATGGTTGTGACGGACTGGGAGATGAATCTAACATGTTACATGAACTCTACTGAAATGGAGTGTTCACAAGATCTTCCAATAACCATTTAcaAGGCACCAGACAGTGTGTCCATCATCACTGTGGATCACAGCGGACCAATGATGGAGGGAGAGGAGTATGAGCTCCAGTGTGACGTTCTCGGTGTGGCTCCTGTTCAGTATCTCACTGTCAAATGGTACAAAGGACAGACTCTGCTGAATCAAACCACCTTTAATGACAACATCAAGACTCCAGTGAATGAAACTGCCACACTCCTGATCCGTCCAGACCGAGCTGATGATGGAGCTCAATATAAGTGTGTAGCAGAGCTGGAACTGGGAGAAGAAGGACCTCCTCCTACAGAATCTGCTTTCAATGCTGAAGTTTACTATAAACCAAAATACTCCATTTCAACAGAGACCATCATTCAAGAAAATCACTGTCCTATTCAAATCGTCCCATGGAGAGCTGTTGTGAAGTACGGTGACCGTGTTTCTGCTGACTGCAAAACTTCAGTCCAGCATCAAGGGATTGGATGGGAAGCCAGTGAGGGAGCAGTGCCCATGATCAGAGACAAGAGTCTGATCACATGGACAGTGTCAGAACTGACAGAATGGGACATTGAGCCATATTGCttcataaactgtaaaaaaggaGATAAGCCGCATCAGTGTTTAGTAAAGCTCCCAGTCACTGTTTACAAGACTCCAGACAGTGTGTCCATCAGCACTGTGAATCACAGCGGACCAATGATGGAGGGAGAGGAGTATGAGCTCCAGTGTGACGTTCTCGGTGTGGCTCCTGTTCAGTATCTCACTGTCAAATGGTACAAAGGACAGACTCTGCTAAATCAACCCACCTTTAATCAAACCACCTTTAATAATGACACCATCCGGACTCCAGTGAATGAAACTGCTACACTCCTGATCCGTCCAGATCGAGCTGATGATGGAGCTCAATATAAGTGTGTAGCAGAGCTGGAACTGGGAGCAGAAGGACCTCAGCCTCATCCCACAATATCATCAGATCCTCTCAACATTACTGTACATTTTGCttcagaatttacattttgtagcGACTGGTCACCATTGACAGAGACCTCGCTGGATTCATATCCTTCAAGTTCCTATTCAGTTGTGGGTAATCCTAAGCCAGACATCTCCTGGACACACAGATCATCATCAGTCAATTCCTCTACAATTCTTAACAAACACGATTCTGGCCGATATGTAATCATTGCCAGCAATTACGGCGGTATTGATAGTTGCTTCGTGAACATAACTGTTGAGTATCCTCCAAATCTGAACTGCAACGGGAGCTatgaagtaaaagaaaatacaccCTTCAAATGGCCTTGCATAGCTGATGGATGTCCAAAGCCTCAATTCTTCCTCTACAAAAATGGGAAAATGCTCCAGCATGACTTTCATCCCAAGTGGAATGATGGTGGCCTTTATAGGTTAACCGCACTTAACAAACACGGAGCTTCTGAATCTTCATTCAACCTCAACGTCCTACATGCTCCAGTGTTTTATGACAGCCAAGATAAGTTTATCGTGGAACAACACAGCAATATAACGCTAGAGTGCCCGTCGACTGGTAACCCAGAACCTGAGGTGTGGTGGagcttcaaaaataaaaacatctccACTGGGAGGCGCCACATAAACATCGAGAGAGCCACGTCTACCAATGCTGGAGTTTACACATGCAGTGCCAGCAATGAATTTGGACGCATTTACAAGAGCTTCTTAGTGGAGATAAAAGATGACATTACCTACTACATTCTGATTGCTGTGGTGGTGGTATctgcattgtttgttttaatctttttagCGGTCTTAATGTGGAAAAGGAGAAAATCAAGAGGATGGTATGAAATACAGCATGAAATGCGGCCCTTAAGCAACGGGGACCATAAGTGAGTTTGATCTTGTTTTAAGAAGCTGCAGATATGTTTACAtcgataaaaacaaaaagaaaaaaaacgccAATGCACTGAACATCAAGGTGGTTACGATAAATACATCTGATAAATATCTGTGGTGTACCATGTTAAACTTAATACTGTACGACATGCACGTTTCATCTGTGTGCCTAGGCCTAATCATTTGGATGATATTTtagtaagaagaaaaaaagcttgaGATGAGTAggtctaataaataaatatttaaaacgtgTCACATGACAAAAttgtttgctgtattttgattaTGGTTACTTGCTTTATAAGTGTTACATACGGTTTGCCTTGAGAGATGAtcatatttagttaaatatgtaaatagaaGTACAAGTTTGTGTTAAATAGCATGTTACTTTTGTtaatttttgctcatttaatgttttttttttgatgatgatgatgatcatgaACAATCTCAAGGGTTAGGTTATAATACAGGTTTGacaacacattttaatgcatgtcCTATAAGTAAAGTTGTATAATAATGATGCAGAAATGATGGACAgatgtttctgaaaataaaataaaaattataacaagCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235552.1 True 2945 mRNA 0.41 10 9563751 9569327

Neighbor

gene id symbol gene type direction distance location
trip10a trip10,trip10a,LOC107596831,LOC107670505,LOC107672474 coding downstream 369 9538376 ~ 9563382 (-)
rdh8a rdh8a,rdh8,LOC107587939,LOC107672484,LOC107711264,LOC107757358,LOC107563317,LOC107670529 coding downstream 222748 9333096 ~ 9341003 (-)
notch3 notch3,LOC107711261,LOC107587940,LOC107757359,LOC107670473,LOC107563318 coding downstream 268902 9265773 ~ 9294849 (-)
shfl zgc:171711,LOC107757360,LOC107563321,LOC107670471 coding downstream 303260 9255441 ~ 9260491 (-)
soul5 LOC107672470,LOC107587943,LOC107757348,LOC107563322 coding downstream 309343 9252311 ~ 9254408 (-)
angptl6 LOC107672431,LOC107587937,LOC107711167 coding upstream 126 9569453 ~ 9577610 (-)
dnmt1 dnmt1,LOC107587934,LOC107672482,LOC107670489 coding upstream 22988 9592315 ~ 9605013 (-)
s1pr2 s1pr2,LOC107711272,LOC107587933,LOC107672500,LOC107596814,LOC107754042 coding upstream 37957 9607284 ~ 9629912 (-)
ubald1b ubald1b,LOC107754052,LOC107672511,LOC107670507,LOC107596822,LOC107587929 coding upstream 105891 9675218 ~ 9678951 (-)
rhbdf1a rhbdf1a,LOC107587928,LOC107711277,LOC107596807,LOC107672493,LOC107754036,LOC107670513 coding upstream 128737 9698064 ~ 9740157 (-)
LOC122342127 NA non-coding downstream 29964 9512446 ~ 9533787 (-)
G18439 olfm2,olfm2a non-coding downstream 78396 9481321 ~ 9485355 (-)
G18426 LOC105357980 non-coding downstream 149744 9413404 ~ 9414007 (-)
G18388 NA non-coding downstream 364049 9198608 ~ 9199702 (-)
G18378 NA non-coding downstream 380480 9182539 ~ 9183271 (-)
G18599 NA non-coding upstream 2273 9571600 ~ 9571805 (-)
G18602 NA non-coding upstream 20594 9589921 ~ 9591291 (-)
G18608 NA non-coding upstream 76986 9646313 ~ 9646566 (-)
G18623 NA non-coding upstream 183908 9753235 ~ 9753522 (-)
G18628 hbaa1,si:ch211-5k11.8,LOC107682494,LOC107587926 non-coding upstream 215922 9785249 ~ 9786124 (-)
G18433 LOC107670519,LOC107563315 other downstream 100846 9426572 ~ 9462905 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other downstream 425662 9134043 ~ 9138089 (-)
zgc:113210 NA other downstream 556308 8992714 ~ 9007443 (-)
fmc1 NA other downstream 1164923 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 1344696 8218902 ~ 8219055 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 424506 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 824987 10394314 ~ 10396341 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other upstream 1442609 11011936 ~ 11064598 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other upstream 1842658 11411985 ~ 11429179 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other upstream 2124945 11694272 ~ 11714719 (-)

Expression


Co-expression Network