hbaa2 (si:ch211-5k11.6,hbz,LOC107587927,LOC107672462,LOC107670501)


Basic Information

Item Value
gene id hbaa2
gene name si:ch211-5k11.6,hbz,LOC107587927,LOC107672462,LOC107670501
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9778492 ~ 9779290 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235569.1
AAAGAGCCCTTATCCTACACCTTAAACTCTGCTCTTCTGATATAGCAAGTCGGAAAGGATCTGAAAATGAGTTTGACAGCTAAGGATAAAGCTGTGGTCAAGGCCTTCTGGGGCAAAATATCTAGCAAGGCCGACGCCATAGGCCAAGAAGCCCTGGGAAGAATGCTCATCGTCTACCCCCagaccaaaatatattttgcccATTGGCCCGATCAATCTATCGGCTCTGCCCAAGTGAAGAAGCACGGCAAAACTGTGATGGGGGCCATCACTGATGCTGTGGGCAAAATGGACGATCTTATCGGTGGACTGAGCTGCTTGAGCGACCTCCACGCCACCAAGCTCCGCGTAGACCCTGGGAACTTTAAGATTCTGTCCCATAACATCCTCGTGACCCTGGCCGTTCATTTCCCCGCTGACTTTACCGCGGAAGTGCACGTGGCCGTGGACAAGTTCCTCGCGGCTCTGTCCGCGGCGCTCGCGGATAAATACAGATAAACTTCCGGTGCTTCACGCGCGTCTGCAGACGGAGGCCTTTCAAACGCTGAAGCTGAAATACCagatgcaattaataaaatctaCAACTATCATAA

Function

symbol description
hbz Predicted to enable several functions, including heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to contribute to haptoglobin binding activity and peroxidase activity. Predicted to be involved in hydrogen peroxide catabolic process. Predicted to act upstream of or within erythrocyte maturation and negative regulation of transcription by RNA polymerase II. Located in extracellular exosome.

NR:

description
PREDICTED: hemoglobin subunit alpha-like

GO:

id name namespace
GO:0015671 oxygen transport biological_process
GO:0005833 hemoglobin complex cellular_component
GO:0005506 iron ion binding molecular_function
GO:0019825 oxygen binding molecular_function
GO:0005344 oxygen carrier activity molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K13822 HBA; hemoglobin subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235569.1 True 593 mRNA 0.51 3 9778492 9779290

Neighbor

gene id symbol gene type direction distance location
mpg si:xx-by187g17.9,LOC107596818,LOC107754030,LOC107670500,LOC107672429,LOC107587979,LOC107711169 coding upstream 17308 9755181 ~ 9761184 (+)
mgrn1b mgrn1,mgrn1b,LOC107754037,LOC107672503,LOC107711275,LOC107670506 coding upstream 85855 9679898 ~ 9692637 (+)
LOC122341977 NA coding upstream 105688 9667567 ~ 9672804 (+)
icam3 NA coding upstream 111887 9656552 ~ 9666605 (+)
eif3g eif3g,LOC107672439,LOC107711270,LOC107754044,LOC107670490 coding upstream 187201 9588010 ~ 9591291 (+)
LOC122341659 si:ch211-5k11.8,hbaa1,LOC107587926 coding downstream 5992 9785282 ~ 9786123 (+)
hbbe1.1 LOC107587921,LOC107596825,LOC107674643,LOC107703325 coding downstream 10065 9789355 ~ 9790164 (+)
hbbe1.2 LOC107703325,LOC107587921,LOC107596828,LOC107596825 coding downstream 13366 9792656 ~ 9793389 (+)
LOC122331228 LOC107596828,LOC107596825,LOC107703325,LOC107587921,LOC107674643 coding downstream 16499 9795789 ~ 9796532 (+)
LOC122332778 NA coding downstream 24283 9803573 ~ 9804386 (+)
G18470 dnmt1,LOC107670489 non-coding upstream 175428 9602642 ~ 9603064 (+)
G18458 LOC107672431,LOC107711167,LOC107587937 non-coding upstream 202590 9574881 ~ 9575902 (+)
G18457 NA non-coding upstream 204003 9574289 ~ 9574489 (+)
G18456 LOC107672431,LOC107587937 non-coding upstream 204230 9573184 ~ 9574262 (+)
G18454 LOC107711167 non-coding upstream 206758 9571154 ~ 9571734 (+)
G18507 NA non-coding downstream 75313 9854603 ~ 9859173 (+)
G18517 NA non-coding downstream 86496 9865786 ~ 9943153 (+)
G18549 prkcsh,LOC107703311,LOC107725022,LOC107754018,LOC107587972 non-coding downstream 131667 9910957 ~ 9911612 (+)
G18671 NA non-coding downstream 494684 10273974 ~ 10302050 (+)
G18744 NA non-coding downstream 792529 10571819 ~ 10579144 (+)
G18491 NA other upstream 28612 9739796 ~ 9749880 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other upstream 80577 9692949 ~ 9697915 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 592832 9184399 ~ 9185660 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other upstream 595202 9138467 ~ 9183290 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other upstream 766314 9010050 ~ 9012178 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other downstream 19525 9798815 ~ 9799796 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other downstream 246528 10025818 ~ 10103461 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 912600 10691890 ~ 10698540 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other downstream 973469 10752759 ~ 10842507 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other downstream 1554451 11333741 ~ 11335825 (+)

Expression


Co-expression Network