slc25a17 (slc25a17,LOC107748783,LOC107672147,LOC107709637,LOC107695117,LOC107602302)


Basic Information

Item Value
gene id slc25a17
gene name slc25a17,LOC107748783,LOC107672147,LOC107709637,LOC107695117,LOC107602302
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 23438398 ~ 23444074 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235613.1
AGTGAACGTTGACAGGGAAATCTCTTCTGCGAAGCGGTGTATAATCCATAAATCGGAACTCTGAAATAACATTATTTGCTTCTGagctaaataaaacaactttgcAGTTACATCTTAGAGTGTCTTAGGATGGGCTCTAGAGATCTGAAACTCCTGGATGTGTTTTCATACGAAAGTCTCGTGCATGCAGTCGCCGGAGCGATGggCAGTGTAACAGCAATGACTGTTTTCTTTCCTCTTGACACAGCTCGGCTCAGGCTGCAAGTTGATGACAAGCGGAAAGCCAAATCTACCCCGGCCATTCTGTCAGAGATCATCAAGGAGGAGGGTCTgtTAGCTCCATACAGAGGCTGGTTTCCTGTGATCTGCAGCCTTTGCTGCTCAAACTTCGTctacttttattgttttcatagtCTGAAGGCCACCTGGCTgcaaggtcaaaggtcaacaCCAGGAAGAGACCTCATATTTGGCATTGCTGCAGGTGTAGTGAACGTTCTTGTGACCACTCCGCTCTGGGTGGTCAATACCAGACTGAAACTGCAGGGGGCGAAATTCAGAAATGAAGACATACAGCCCACGCACTACAGCGGAATTATTGATGCGTTTGCACAGATCGTGCAGCAGGAAGGAGTGGGTGCGTTATGGAACGGGACGTTCCCCTCCCTGCTGCTGGTGCTCAATCCCGCCGTGCAGTTCATGATCTACGAGGGTCTGAAGAGGCAGCTCACGAGGGGCGTCCACAGAGAGCTCTCCTCAGTGGAGGTGTTTCTTATAGGAGCCATTGCCAAGGCCGTAGCAACCACCATAACCTACCCTCTACAGACAGTTCAGTCTGTCCTACGGTTTGGACAGCACGGGCAGCCCGCGGGTCAGTCCAAACTCCTGAGCAGCCTGAGATCTGTCATGCATCTGCTGATCAATAGAGTCAGGAAGTGGGGCATGCTGGGATTGTTTAAAGGCCTGGAGGCGAAGCTGCTTCAGACGGTCCTCACCGCCGCACTGATGTTCTTGCTGTACGAGAAGATCGCCAGCGCAACCTTTAGGGTCATGGGGGTCAGACGCACAGCGATGGCCCACTGACCTCTCACGGGACGTTTATTAGTACGAGTATACACGAGTTATGAAAAATGGTcacgtgtttttattttttctaaattattgcAAAAGACAGGAACATTCAAATGTTATGACACACTtgacttgaaataaataaaatataagtaataagTACAATATAAATATCAGGGGAgaacatgtaaacaaacattagAAAACTATTAAACACTAATATTAGAATTAagactgaaaatattaaacagtggctaatttaaaatattataacgCTTTATTAGCATGTACATAATACTACACTAACGCTGATTCATAGATTTATAAACTGgttataaaatgtcaaaaatgttttgtgctcctttttagtttttgtataaTTCTCATGTCcgtttgtgttattattttatagtttaacgacattactattattattgagAAAATGCTGAAGGAAAGAGTAAGTGTGTCAAACGTTTGATTCAtggattaatataaataattatcacAAAAAAAGGGTGTATGCAGTACTTATATGATAAATGCATTGTGTACcctttaatgaaaaaatgccTTAATAGGTCAATACCTTGGTCAgtatttaatgtagtttttaaaggaatatttcatttaaaatatgaactgatttgttttatgaatttcAACAAGTCTGGACTGGTTTATATAGTGTCAAAACGAAAATCATGCACGTGTGATGTATCTGTTTTGCAAGATCATTGCTGTCAACCTGGTCTTAGATCAGCCTTCCTGCATTGATTCAGTTTACAGACCGAAAACAGCTTCTAGACTAGTTTTTCTGGTTCTGTGTAAGTGATACTTGACAGCACAAAGTCACTGACACCATAATTGacttttatgcttaaaaatgtttacagtctGGGCATAAAAATAACTTCAGTAACGGGTTGTAGAATTAACCAGTTAGTGAATCAGCTTCACAGGCATCATGACGTCTCAACTGTGAAGACACTGAGCTTGAGGCTCAAGTGCATGCTTTATGTACAGAATCATCATGGATGAATCCGTACTGATATTTAGATAGTAAAATCATTTCTCTCTCAGCACTGATGGTCACACTGTACTAGAATGCATATAGTTACAGTTGtgtatgaatgtaaaatgtggatgtttatttttgaatgttaatgattctattaaacatgaaattgaaaata

Function

symbol description
slc25a17 Predicted to enable nucleotide transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of peroxisomal membrane. Is expressed in gut; head; and swim bladder. Orthologous to human SLC25A17 (solute carrier family 25 member 17).

NR:

description
peroxisomal membrane protein PMP34-like isoform X2

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K13354 SLC25A17, PMP34; solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235613.1 True 2264 mRNA 0.41 9 23438398 23444074

Neighbor

gene id symbol gene type direction distance location
sp100.4 LOC107748809,LOC107583267 coding upstream 17424 23415427 ~ 23420974 (+)
si:dkey-68o6.8 NA coding upstream 25592 23410619 ~ 23412806 (+)
LOC122341912 LOC107695123 coding upstream 37476 23397759 ~ 23400922 (+)
LOC122341358 LOC107585025,LOC107716530,LOC107662363 coding upstream 46211 23372660 ~ 23392187 (+)
LOC122341901 LOC107740603,LOC107662366,LOC107690737,LOC107602322,LOC107585068 coding upstream 101913 23326597 ~ 23336485 (+)
mrtfaa LOC107695127,LOC107723606,LOC107602328 coding downstream 912 23444986 ~ 23480291 (+)
cbx7a LOC107695130,LOC107748788,LOC107583303,LOC107602332,LOC107672137,LOC107723608 coding downstream 138357 23582431 ~ 23587628 (+)
st13 st13,LOC107695132,LOC107672142,LOC107602335,LOC107583261 coding downstream 192287 23636361 ~ 23644540 (+)
napsa zgc:63831,LOC107695135,LOC107748792,LOC107583260,LOC107672139,LOC107723590 coding downstream 211437 23655511 ~ 23661345 (+)
si:ch211-256m1.8 si:ch211-256m1.8,LOC107748794,LOC107695133,LOC107583259,LOC107723616,LOC107672154,LOC107602338 coding downstream 229958 23674032 ~ 23681012 (+)
LOC122341920 LOC107672134,LOC107602299 non-coding upstream 23489 23412813 ~ 23414909 (+)
LOC122341922 LOC107695122,LOC107583308 non-coding upstream 37476 23396501 ~ 23400922 (+)
G22582 LOC107687786,LOC107710056,LOC107662412,LOC107740652,LOC107585075,LOC107582935,LOC105912825,LOC103364773 non-coding upstream 289780 23100944 ~ 23148618 (+)
G22584 NA non-coding upstream 321558 23114278 ~ 23116840 (+)
G22581 LOC107740652,LOC107662412,LOC107582935,LOC107687786,LOC107710056,LOC107578312,LOC107577241 non-coding upstream 342976 23089473 ~ 23095422 (+)
G22754 NA non-coding downstream 118966 23563040 ~ 23563246 (+)
G22757 NA non-coding downstream 130824 23574898 ~ 23578241 (+)
G22758 NA non-coding downstream 134402 23578476 ~ 23646166 (+)
G22800 NA non-coding downstream 223831 23667905 ~ 23672990 (+)
G22795 ddx5,LOC107695114,LOC108432077,LOC107583258,LOC107723600,LOC107602339,LOC103024726,LOC103143670,LOC106937022 non-coding downstream 227320 23671394 ~ 23749009 (+)
zmp:0000000912 LOC107748810,LOC107695116,LOC107583322,LOC107695109,LOC107583307,LOC107709636,LOC107672113,LOC107602301 other upstream 6632 23424621 ~ 23431766 (+)
LOC122341907 NA other upstream 29584 23403441 ~ 23408814 (+)
LOC122341898 LOC107662363 other upstream 76456 23343964 ~ 23361942 (+)
dnal4a dnal4a,dnal4,LOC107662365,LOC107585028,LOC107690743,LOC107740666,LOC107710037 other upstream 94758 23338379 ~ 23343640 (+)
prr15la prr15la,LOC107710040,LOC107585086,LOC107662431,LOC107582938,LOC108412372 other upstream 274682 23158219 ~ 23163716 (+)
c1qtnf6a c1qtnf6,c1qtnf6a,mgat3a,LOC107695119,LOC107723613,LOC107672153,LOC107583300,LOC107748818,LOC107580620,LOC107695120 other downstream 265429 23709503 ~ 23721719 (+)
LOC122342055 pik3r6,LOC107719336,LOC107703883,LOC107563351,LOC107728708,LOC107583295 other downstream 595828 24039902 ~ 24051913 (+)
G22958 NA other downstream 650950 24095024 ~ 24097159 (+)
G22996 LOC107703883,LOC107563351,LOC107719336,LOC107583295 other downstream 989981 24434055 ~ 24439463 (+)
G22953 mfsd6l,LOC107719337,LOC107583315,LOC107563357,LOC107728393,LOC107703882 other downstream 1002804 24446878 ~ 24449289 (+)

Expression


Co-expression Network