mylk5 (LOC107583040,LOC107729567,LOC107658462)


Basic Information

Item Value
gene id mylk5
gene name LOC107583040,LOC107729567,LOC107658462
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 11616195 ~ 11629282 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235666.1
ATCACTAGTCAATATagcacacactcgctctctcttATCGccacttctctttctctttcaccaCAGTCATAGTTTATGTTGAAAAGCAAACCGTGTTACAGATATAGTTACGGGTGGGGTTTGCGACAAGCCCAGCAAGAGGACAGTGTTCTGCAGACCGACTGAATGAGGAGTCAGTCGCGGGGAGGAGCCAGAAACTAAAGAGATGCAGAGAACTGCTCTGGACAGGAGACATGTGTGCGTAGCAAAGACTCAAGAGACACAGGAAAGTACAAGCCACCTGATAAGAAGGCTGGGAAATGACTTGGATTTTATGAAACTGGTATGAACAGACAGGAGAAATGAGCATTGCTGATGGGAAGACGCGATACGTGTCCACTTTCAGGATACAGCTGTCCAGCTCCCAGTCAAAGGGGGCCAAAACGGGACAAGCGTCCCAACCGGCACACATCCCCACAATCACCACAGCCGCCAAGAAGCCTGGAGAGACTTCCAACGCAGTGAGTAGTAAACACAGTCACACTAGTGGTCTGGATCCACCGGTTTTTACTGAGCCCCTTGATGACTATATAGTGGATGAAGGAAATGACATCACGCTGAAAGGGACTATCACAGGGAGCCAGCCAATAAGCATTTCCTGGCTTCATAATGGTGAGCCTGTGCTGTTTGGAAAATCCTCATTAGTAGGAGGAGAAGTTACTTTGATAGTTAGGGAATGTCTCCCAGAGGATGCTGGGGCTTATACATGTGTGGCTGAAAACACAGCAGGAAAAACATCCAGCAGTGCAGCAGTGTGCGTGAGAGACTATGAAACAATCATTGGGATCCGTAACAATATTGCCAACACATCTCAGTCTCATCCTAATCCCTCTCATCCTCACATCCCTGCCATGCTAAGCGGGGTCTTAAACTCATCTCAGAGCGTCCCAGAAGacatcagtgtttttaaaggcCCACAGTCACCGCAGTCACCTCAGACAGGAAGTCCTACAACGCTCAAGAGAGAGGTGCTTGTCAAGAGAAGAAGCAGCTCCGGTACAGcACCTCCTCTGCAGTTTGTAGATCCTTTAGATCGTCTGGAAGTGCATGTTGGAGAAACGGCTCgttttaagtgtgtgtttaaaggcAGCTCTCGTGTAGCTTCTTGCTGGGTCTATAACAAAAAAGAGGTGGTGGAAAGCTCCAGGCTTCATATTGAGTCCTGCAACGAAAGCAGTTCTCTGGTGATTTCTGACGCCCGTCCTGAGGACTCTGGACGTTACACATTATTTGTACGAGATCGCAAAAGTTCAGCCCAACACACAGTGACCCTGAATGTCATTGACCTGCCTCAGGCGCCAGCCTCCTGTCCCGTGGCGTATGTCCTCTCCCCTCACTCTCTGGTTTTGTCCTGGTCTGGGCCATCCTACGATGGCGGCAGTGCTGTGACGGGATACGTGGTGGAGGTTTGTGAAAGCCCAGGTGTGACTGACCATTGGAGAGAGCTCACAGCCCAGTGCAAGAGCACCTCGTTTAGGGTGACCTCAGGACTCCAGCCTCAAGAAGAATACTGCTTCCGGATCAGGGCCTGTAACGCTGTGGGGGTCAGCGAACCAAGCCAAGAGTCCCAGCCAATCAAGATGGACAATCCAGGAGAGCCCTGTGACGAGAAACCAGTGGAGTATGTGACTGTGACCATCAACACAAAGGATAAACTTACTGACCATTATAACGTCCAGGAAAAGCTCGGAGTAGGGAAGTTTGGGCAGGTGTTTCGGATGACCCATAAGGAGACGGGCCGTGTTCGCGCGGGGAAGTTCTACAAAGGTCGTCGGACAAAGGAGAGAGAGGCTGCGAGGAAAGAAATAGAGCTAATGAATTTCCTGCACCATCCAAAACTCGTGCAGTGTCTTGCCGCATACGATAACAAGGATGAGATGGTCATGGTGATGGAATAtgTTGCTGGTGGAGAGCTGTTTGAGCGCATTGTGGATGATAGTTTTGAGCACACCGAAGTGTCCAGTGTGGGCTACATGCGTCAGATTCTGGAGGGGATTCAGTACATGCACCAGCAACACATTGTCCACCTGGACCTCAAACCTGAGAACATCGTCTGTGTGGACAGAACCGGGATTCAGATCAAAATCATTGACTTTGGACTCGCTAGCAAACTGGATCCCAACACCCCCGTGAAGGTGATGCACGGCACTCCAGAATTCGTCGCTCCAGAGGTCATCAACTATGAGCCCATATGCCTGGCCACCGACATGTGGAGCATCGGGGTCATCTGCTACATCCTGTTGAGCGGCGAGTCTCCGTTCCAGGGTGAAAGCGACACGGAGACTCTGGCTCTGGTGACAGCGGCGCAGTGGGAGTTTGACGAGGAGAGCTTTGAAGATATCAGCAAGCTGGCGAAGGATTTCATTAGCTCTCTGCTCAGCAAAGATGTCAGGCGCAGGATGTCATGTGAAGAAGCCTTGGCTCATTCCTGGTTGGTGCACACTTGCGTAGACAACGGCGGCGGCGGCAGCAGCACCAAAAACCTTTCCAAAGACAAGATGAAGAAATTCCTCACTAGGCAGAAGTGGAAGAAAACAGGCAAAGCGCTGCTGGCTCTGAAGAGGATGGCTATATTGTCTAAACCAGAGGCTTCTGCGAGCTTGAGCCCTGTGGATGAGACGGAGAAGACGCTGCAGACTCTGGAGCTGAAGCTTCAGAGTAAGCCCGAGTTCAGTAAGACTCCGTGTGACCTGACTGTGCCGGAGGGCTCCAGCGCCCAGCTCTCCTGTCTCATCACAGGCTACCCTGACCCCGAGGTGGTGTGGCTGAAGGACGGAGATCTGCTGGAGCTGCAGGAGGAGTGTGTTCAGGTGGACTATGAGGAGGACGGCAGCTGTACTCTCACCTTAGAGAACGTCTCTCCGCTCCACAGCGGCCTGTATTCCTGCAAAGCCACTAATGTACTCGGGGAGGCACTGTGCTCTGCTTCTCTGACCGTCGAGGAGATAGACTAACACACGAatacataatgaaataaaaaaatacacaccagACAGAATAAAATACACTGTTGAATCAGTGCCAATATAATTATAAACTGAATGTtacaattgtaataaaaaaaatctaattg
>XM_043235667.1
AATCACTAGTCAATATagcacacactcgctctctcttATCGccacttctctttctctttcaccaCAGTCATAGTTTATGTTGAAAAGCAAACCGTGTTACAGATATAGTTACGGGTGGGGTTTGCGACAAGCCCAGCAAGAGGACAGTGTTCTGCAGACCGACTGAATGAGGAGTCAGTCGCGGGGAGGAGCCAGAAACTAAAGAGATGCAGAGAACTGCTCTGGACAGGAGACATGTGTGCGTAGCAAAGACTCAAGAGACACAGGAAAGTACAAGCCACCTGATAAGAAGGCTGGGAAATGACTTGGATTTTATGAAACTGGTATGAACAGACAGGAGAAATGAGCATTGCTGATGGGAAGACGCGATACGTGTCCACTTTCAGGATACAGCTGTCCAGCTCCCAGTCAAAGGGGGCCAAAACGGGACAAGCGTCCCAACCGGCACACATCCCCACAATCACCACAGCCGCCAAGAAGCCTGGAGAGACTTCCAACGCAGTGAGTAGTAAACACAGTCACACTAGTGGTCTGGATCCACCGGTTTTTACTGAGCCCCTTGATGACTATATAGTGGATGAAGGAAATGACATCACGCTGAAAGGGACTATCACAGGGAGCCAGCCAATAAGCATTTCCTGGCTTCATAATGGTGAGCCTGTGCTGTTTGGAAAATCCTCATTAGTAGGAGGAGAAGTTACTTTGATAGTTAGGGAATGTCTCCCAGAGGATGCTGGGGCTTATACATGTGTGGCTGAAAACACAGCAGGAAAAACATCCAGCAGTGCAGCAGTGTGCGTGAGAGACTATGAAACAATCATTGGGATCCGTAACAATATTGCCAACACATCTCAGTCTCATCCTAATCCCTCTCATCCTCACATCCCTGCCATGCTAAGCGGGGTCTTAAACTCATCTCAGAGCGTCCCAGAAGacatcagtgtttttaaaggcCCACAGTCACCGCAGTCACCTCAGACAGGAAGTCCTACAACGCTCAAGAGAGAGGTGCTTGTCAAGAGAAGAAGCAGCTCCGGTACAGcACCTCCTCTGCAGTTTGTAGATCCTTTAGATCGTCTGGAAGTGCATGTTGGAGAAACGGCTCgttttaagtgtgtgtttaaaggcAGCTCTCGTGTAGCTTCTTGCTGGGTCTATAACAAAAAAGAGGTGGTGGAAAGCTCCAGGCTTCATATTGAGTCCTGCAACGAAAGCAGTTCTCTGGTGATTTCTGACGCCCGTCCTGAGGACTCTGGACGTTACACATTATTTGTACGAGATCGCAAAAGTTCAGCCCAACACACAGTGACCCTGAATGTCATTGACCTGCCTCAGGCGCCAGCCTCCTGTCCCGTGGCGTATGTCCTCTCCCCTCACTCTCTGGTTTTGTCCTGGTCTGGGCCATCCTACGATGGCGGCAGTGCTGTGACGGGATACGTGGTGGAGGTTTGTGAAAGCCCAGGTGTGACTGACCATTGGAGAGAGCTCACAGCCCAGTGCAAGAGCACCTCGTTTAGGGTGACCTCAGGACTCCAGCCTCAAGAAGAATACTGCTTCCGGATCAGGGCCTGTAACGCTGTGGGGGTCAGCGAACCAAGCCAAGAGTCCCAGCCAATCAAGATGGACAATCCAGAGCCCTGTGACGAGAAACCAGTGGAGTATGTGACTGTGACCATCAACACAAAGGATAAACTTACTGACCATTATAACGTCCAGGAAAAGCTCGGAGTAGGGAAGTTTGGGCAGGTGTTTCGGATGACCCATAAGGAGACGGGCCGTGTTCGCGCGGGGAAGTTCTACAAAGGTCGTCGGACAAAGGAGAGAGAGGCTGCGAGGAAAGAAATAGAGCTAATGAATTTCCTGCACCATCCAAAACTCGTGCAGTGTCTTGCCGCATACGATAACAAGGATGAGATGGTCATGGTGATGGAATAtgTTGCTGGTGGAGAGCTGTTTGAGCGCATTGTGGATGATAGTTTTGAGCACACCGAAGTGTCCAGTGTGGGCTACATGCGTCAGATTCTGGAGGGGATTCAGTACATGCACCAGCAACACATTGTCCACCTGGACCTCAAACCTGAGAACATCGTCTGTGTGGACAGAACCGGGATTCAGATCAAAATCATTGACTTTGGACTCGCTAGCAAACTGGATCCCAACACCCCCGTGAAGGTGATGCACGGCACTCCAGAATTCGTCGCTCCAGAGGTCATCAACTATGAGCCCATATGCCTGGCCACCGACATGTGGAGCATCGGGGTCATCTGCTACATCCTGTTGAGCGGCGAGTCTCCGTTCCAGGGTGAAAGCGACACGGAGACTCTGGCTCTGGTGACAGCGGCGCAGTGGGAGTTTGACGAGGAGAGCTTTGAAGATATCAGCAAGCTGGCGAAGGATTTCATTAGCTCTCTGCTCAGCAAAGATGTCAGGCGCAGGATGTCATGTGAAGAAGCCTTGGCTCATTCCTGGTTGGTGCACACTTGCGTAGACAACGGCGGCGGCGGCAGCAGCACCAAAAACCTTTCCAAAGACAAGATGAAGAAATTCCTCACTAGGCAGAAGTGGAAGAAAACAGGCAAAGCGCTGCTGGCTCTGAAGAGGATGGCTATATTGTCTAAACCAGAGGCTTCTGCGAGCTTGAGCCCTGTGGATGAGACGGAGAAGACGCTGCAGACTCTGGAGCTGAAGCTTCAGAGTAAGCCCGAGTTCAGTAAGACTCCGTGTGACCTGACTGTGCCGGAGGGCTCCAGCGCCCAGCTCTCCTGTCTCATCACAGGCTACCCTGACCCCGAGGTGGTGTGGCTGAAGGACGGAGATCTGCTGGAGCTGCAGGAGGAGTGTGTTCAGGTGGACTATGAGGAGGACGGCAGCTGTACTCTCACCTTAGAGAACGTCTCTCCGCTCCACAGCGGCCTGTATTCCTGCAAAGCCACTAATGTACTCGGGGAGGCACTGTGCTCTGCTTCTCTGACCGTCGAGGAGATAGACTAACACACGAatacataatgaaataaaaaaatacacaccagACAGAATAAAATACACTGTTGAATCAGTGCCAATATAATTATAAACTGAATGTtacaattgtaataaaaaaaatctaattg

Function

NR:

description
PREDICTED: myosin light chain kinase, smooth muscle-like isoform X2

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235666.1 True 3112 mRNA 0.50 17 11616196 11629282
XM_043235667.1 False 3110 mRNA 0.50 17 11616195 11629282

Neighbor

gene id symbol gene type direction distance location
fzd2 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC107721960,LOC107564008,LOC107674136 coding upstream 10018 11603674 ~ 11606177 (+)
ccdc43 LOC107674137,LOC107729438,LOC107583050,LOC107658459,LOC107721961,LOC107564021 coding upstream 22027 11591600 ~ 11594168 (+)
LOC122341817 c1ql1,LOC107729572,LOC107658458,LOC107583048,LOC107674128,LOC103367899,LOC101070426,LOC104923905 coding upstream 101036 11497653 ~ 11515159 (+)
clec19a clec19a,LOC107658453,LOC107583104,LOC107736754 coding upstream 202926 11408037 ~ 11413269 (+)
si:dkey-66i24.8 LOC107658431,LOC107583056,LOC107729444,LOC107732851 coding upstream 249080 11362983 ~ 11367115 (+)
dcaf7 dcaf7,LOC105030232,LOC105898766,LOC100702343 coding downstream 11420 11640702 ~ 11645443 (+)
strada strada,LOC107693497,LOC107658471,LOC107548327,LOC107730762 coding downstream 110997 11740279 ~ 11749928 (+)
snrnp70 LOC107729450,LOC107693498,LOC107658470,LOC107730757,LOC107548330,LOC107583035 coding downstream 124966 11754248 ~ 11762534 (+)
lin7b lin7b,LOC107730776,LOC107548331,LOC107693502,LOC107658474 coding downstream 133390 11762672 ~ 11767501 (+)
zgc:193811 LOC107693501,LOC107548311,LOC107583087,LOC107729427 coding downstream 138606 11767888 ~ 11772504 (+)
G19126 NA non-coding upstream 174857 11440506 ~ 11441338 (+)
G19123 NA non-coding upstream 178998 11436944 ~ 11437197 (+)
G18946 smg1,LOC107729485,LOC107583093,LOC107658410,LOC107732845 non-coding upstream 235405 11380273 ~ 11380790 (+)
G18982 NA non-coding upstream 240794 11371502 ~ 11375401 (+)
G18960 paqr4a,paqr4,LOC107674132 non-coding upstream 321590 11289747 ~ 11294605 (+)
G19184 NA non-coding downstream 83327 11712609 ~ 11719579 (+)
LOC122338225 NA non-coding downstream 205490 11834772 ~ 11835253 (+)
G19208 NA non-coding downstream 338366 11967648 ~ 11974006 (+)
G19255 NA non-coding downstream 443437 12072719 ~ 12073073 (+)
G19257 NA non-coding downstream 444949 12074231 ~ 12074503 (+)
G18949 NA other upstream 246443 11368893 ~ 11369752 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other upstream 280370 11333741 ~ 11335825 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other upstream 773688 10752759 ~ 10842507 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other upstream 917655 10691890 ~ 10698540 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other upstream 1512734 10025818 ~ 10103461 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other downstream 143918 11773200 ~ 11833924 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other downstream 256373 11885655 ~ 11893656 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other downstream 397867 12027149 ~ 12049422 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other downstream 463321 12092603 ~ 12100852 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other downstream 484766 12114048 ~ 12117939 (+)

Expression


Co-expression Network