olfm2a (olfm2a,olfm2,LOC107563315,LOC107670519)


Basic Information

Item Value
gene id olfm2a
gene name olfm2a,olfm2,LOC107563315,LOC107670519
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9428864 ~ 9487188 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235675.1
agagagagagagagaaagagagagacagatgcagCCAATGCGCAGCGCGGCATCTTGAAAGAGcaagagaggagagaaagagagagagaaaagaagggAGGGAGAGGGAGCGGAGGAGTGCGAGTCGGGCACTGGCAGTCGCTCTTCGGCTGAAGAATAACGTGTGTCGTGCATCGCTGTGATGCCATCGGATCCGAGCGGCTGGTACGTGTGAGACTCTCTTGTACACGTGCAGCCGATTGTCCCTTGGCTGGAGGAAGAGGGAGGAGGAAGGTGCATCAGGTTCGTGTCCGTTCTTGCGCGCTGCATCTGGACCCCGGCGCCAGGGAGTGTGGGGGGGCACTAGGGCCAGGCGGCCGGCCGGGGGACGACATGAGCGTTCCGCTCCTGAAGATTGGCGCGGTGCTCAGCACCATGGCCATGGTCACCAACTGGATGTCCCAGACACTGCCCTCACTGGTGGGGCTCAACGGAACCACCATCTCCCGCGCAGGAACCTCGGAAAGGATCGTCAGTGCCCTGTATCCGAGCCCAGAGGAAGGCTGGCAGATCTACAGCTCGGCACAGGACGCAGATGGGAAATGTATCTGCACAGTTGTGGCTCCTGCACAGAACATGTGTAATCGAGACCCACGCAGCAGACAGCTCCGTCAGCTTATGGAGAAGGTTCAGAATATAACTCAATCCATGGAGGTTCTAGATCTTAGGACGTACAGAGACCTGCAGTACGTGAGAGACACAGAGAACCTCATGAAAACAGTGGACGGTAAACTGAAGACTGCTTCTGAAAATCCACGCAGCCTGAACCCCAAGAGCTTTCAGGAGTTAAAGGACAAGGTTACTCAGCTGCTTCCGCTGCTCCCAGTGCTGGAACAGTACAAGGCAGATGCAAGAATGATCCTTCGGCTGAGGGAGGAGGTGAGGAATCTGTCTCTGGTACTAATGGCAATTCAAGAGGAGATGGGAGCCTATGACTACGAGGAGCTCAGGCAGCGAGTGCTACTGCTGGAGACTCGTCTGCACTCCTGCATGCAGAAACTCGGTTGCGGGAAGCTAACTGGCGTCAGTAACCCCATCACCGTCCGCGCTTCAGGGTCAAGGTTCGGATCCTGGATGACTGACACAATGATTCCCAGCTCCGATAATAGGGTGTGGTCAATGGACGGTTACTTTAAGGGACGTCGCGTGCTGGAGTACCGCACAATGAACGACTTCATGAAAGGCCAAAACTTTGTGCAGCATCTCCTGCCCCACCCTTGGGCTGGTACAGGTCACGTGGTCTACAACGGCTCCCTCTACTACAACAAATATCAGAGTAACATCCTCATCAAGTACCACTTCCGATCCCGAAGCATCCTGGTGCAGCGCAGCCTTAGTGGCGCGGGCTACAACAACACCTTTCCCTACTCTTGGGGTGGATCGTCTGACATCGACCTCATGGCCGACGAGAACGGGCTATGGGCCGTCTACACTACCATTCCCAACGCTGGAAACATCGTCATTAGCCGCCTGGAGCCACAAAGCCTGGAAGTGCTTCAGACGTGGGACACGGGCTTCCCTAAACGGAGCGCCGGCGAGTCGTTCATGATCTGCGGCACGCTCTATGTCACCAACTCCCACCTGGCCGGTGCTAAGATCTACTTCGCATATTACACCAACACCTCAACCTATGAGTACACAGACATCCCCTTCCATAACCAATACTCCCACATTTCCATGATGGACTACAACCCCCGAGAAAGAGTGCTCTACACTTGGAACAACGGACATCAAGTCCTCTACAATGTCACTTTGTTCCAAGTCATCAAAACAGCTGAGGACTAGGTCATGCAGACCTTACAAACACATTTGCTTATacacaaatgtacacacactgaTATGcctacacacatatacacacacatttatgtggAGGAGGACATGACTAAAGCTTAGACTTTTTAACCGCATTCCAAACTTCATAGAGTGCTATTATTCATCTAAAGTTCTGAGGAGAGCAAGATTGGTACTGGTACATAAACTGAgcctttattttctttcctgtGATGATTCAGCATGAgtactttctttttatttgtggaaaaagaataaataaacatcaaactTTACCATT
>XM_043235676.1
TTCCGCTCCCAGAGCGTCAATGTGTGCTGCTCCTAGCGTCGGAGCATCGCAAGCACATTAGTCACCTTCCAACCTCTGCAACTCGAGCTCAGGCAGTCGATCCCACTTCAAAAAGCCTGCCGAGAAGGGAACTGCTCGACTTCATTTCCCGCGCCCGTTTACAACGCTGACCTCTTGGTGGCGGTCACAAGCGAAAGATAGGAGACTAATCAAAAAACACAAGGCGGCTCGTTGTGCCGTGGCACAGTGGGGGTAATCTGCCTCCGTGAGCGGAATAAAGCCCAGCGCGTGCCGCCTGTGATGTGGATCGTCGCGCGCGCTCGACAGAACGTTGACAGAATCCTGCGCGGAGCTTAAGCGAGGCGGGCGAGCTCTGAAAACGAAAGTGCCCGAGTGCTGGTGGTGGTCGGGAACGCTGTCATTTCGAGAGGAATGCATCTATTCAGTGCCATGTTCCTGCTGCTGATGTTATCTACTATACCCTGCGAGGCCCTGTATCCGAGCCCAGAGGAAGGCTGGCAGATCTACAGCTCGGCACAGGACGCAGATGGGAAATGTATCTGCACAGTTGTGGCTCCTGCACAGAACATGTGTAATCGAGACCCACGCAGCAGACAGCTCCGTCAGCTTATGGAGAAGGTTCAGAATATAACTCAATCCATGGAGGTTCTAGATCTTAGGACGTACAGAGACCTGCAGTACGTGAGAGACACAGAGAACCTCATGAAAACAGTGGACGGTAAACTGAAGACTGCTTCTGAAAATCCACGCAGCCTGAACCCCAAGAGCTTTCAGGAGTTAAAGGACAAGGTTACTCAGCTGCTTCCGCTGCTCCCAGTGCTGGAACAGTACAAGGCAGATGCAAGAATGATCCTTCGGCTGAGGGAGGAGGTGAGGAATCTGTCTCTGGTACTAATGGCAATTCAAGAGGAGATGGGAGCCTATGACTACGAGGAGCTCAGGCAGCGAGTGCTACTGCTGGAGACTCGTCTGCACTCCTGCATGCAGAAACTCGGTTGCGGGAAGCTAACTGGCGTCAGTAACCCCATCACCGTCCGCGCTTCAGGGTCAAGGTTCGGATCCTGGATGACTGACACAATGATTCCCAGCTCCGATAATAGGGTGTGGTCAATGGACGGTTACTTTAAGGGACGTCGCGTGCTGGAGTACCGCACAATGAACGACTTCATGAAAGGCCAAAACTTTGTGCAGCATCTCCTGCCCCACCCTTGGGCTGGTACAGGTCACGTGGTCTACAACGGCTCCCTCTACTACAACAAATATCAGAGTAACATCCTCATCAAGTACCACTTCCGATCCCGAAGCATCCTGGTGCAGCGCAGCCTTAGTGGCGCGGGCTACAACAACACCTTTCCCTACTCTTGGGGTGGATCGTCTGACATCGACCTCATGGCCGACGAGAACGGGCTATGGGCCGTCTACACTACCATTCCCAACGCTGGAAACATCGTCATTAGCCGCCTGGAGCCACAAAGCCTGGAAGTGCTTCAGACGTGGGACACGGGCTTCCCTAAACGGAGCGCCGGCGAGTCGTTCATGATCTGCGGCACGCTCTATGTCACCAACTCCCACCTGGCCGGTGCTAAGATCTACTTCGCATATTACACCAACACCTCAACCTATGAGTACACAGACATCCCCTTCCATAACCAATACTCCCACATTTCCATGATGGACTACAACCCCCGAGAAAGAGTGCTCTACACTTGGAACAACGGACATCAAGTCCTCTACAATGTCACTTTGTTCCAAGTCATCAAAACAGCTGAGGACTAGGTCATGCAGACCTTACAAACACATTTGCTTATacacaaatgtacacacactgaTATGcctacacacatatacacacacatttatgtggAGGAGGACATGACTAAAGCTTAGACTTTTTAACCGCATTCCAAACTTCATAGAGTGCTATTATTCATCTAAAGTTCTGAGGAGAGCAAGATTGGTACTGGTACATAAACTGAgcctttattttctttcctgtGATGATTCAGCATGAgtactttctttttatttgtggaaaaagaataaataaacatcaaactTTACCATT

Function

symbol description
olfm2a Acts upstream of or within neural crest cell development. Predicted to be located in extracellular region and synapse. Is expressed in several structures, including midbrain neural tube; nervous system; optic cup; optic vesicle; and pancreatic system. Orthologous to human OLFM2 (olfactomedin 2).
olfm2 Involved in positive regulation of smooth muscle cell differentiation. Acts upstream of or within protein secretion. Located in cytoplasm; extracellular region; and nucleoplasm.

NR:

description
noelin-2

GO:

id name namespace
GO:0014032 neural crest cell development biological_process

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235675.1 True 2113 mRNA 0.52 6 9462389 9487188
XM_043235676.1 False 2086 mRNA 0.51 6 9428864 9487188

Neighbor

gene id symbol gene type direction distance location
col5a3a col5a3a,LOC107672483,LOC107711265,LOC107563316,LOC107757338,LOC107670510,LOC107587984 coding upstream 28054 9353698 ~ 9400810 (+)
zmp:0000001048 zmp:0000001048,LOC107711259,LOC107670472,LOC107563320 coding upstream 161134 9260905 ~ 9267730 (+)
camsap3 LOC107711256,LOC107672468,LOC107587945,LOC107670479,LOC107757361 coding upstream 183207 9214244 ~ 9245657 (+)
xab2 xab2,LOC107672506,LOC107670481 coding upstream 215930 9206654 ~ 9212934 (+)
LOC122341842 LOC107588008 coding upstream 222510 9202831 ~ 9206354 (+)
ppan ppan,LOC107672501,LOC107711268,LOC107670430,LOC107754053 coding downstream 90537 9577725 ~ 9582385 (+)
p2ry11 p2ry11,LOC107711269,LOC107672502,LOC107670465,LOC107754043 coding downstream 95186 9582374 ~ 9586218 (+)
eif3g eif3g,LOC107672439,LOC107711270,LOC107754044,LOC107670490 coding downstream 100822 9588010 ~ 9591291 (+)
icam3 NA coding downstream 169364 9656552 ~ 9666605 (+)
LOC122341977 NA coding downstream 180379 9667567 ~ 9672804 (+)
G18425 LOC105357980 non-coding upstream 14857 9413644 ~ 9414007 (+)
G18305 NA non-coding upstream 166625 9261970 ~ 9262239 (+)
G18303 NA non-coding upstream 178234 9250099 ~ 9250630 (+)
G18261 hs3st2,LOC107550309,LOC107703334,LOC107741797,LOC107574133,LOC107674621 non-coding upstream 546742 8881198 ~ 8882122 (+)
G18092 NA non-coding upstream 752978 8671661 ~ 8675886 (+)
G18443 NA non-coding downstream 54512 9541700 ~ 9543366 (+)
G18453 NA non-coding downstream 82850 9570038 ~ 9570283 (+)
G18454 LOC107711167 non-coding downstream 83966 9571154 ~ 9571734 (+)
G18456 LOC107672431,LOC107587937 non-coding downstream 85996 9573184 ~ 9574262 (+)
G18457 NA non-coding downstream 87101 9574289 ~ 9574489 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 243204 9184399 ~ 9185660 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other upstream 245574 9138467 ~ 9183290 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other upstream 416686 9010050 ~ 9012178 (+)
LOC122341292 LOC107729471,LOC107687638 other upstream 440054 8980591 ~ 8988810 (+)
LOC122331854 mgp,LOC107574611,LOC107569876 other upstream 877713 8544291 ~ 8551151 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other downstream 205761 9692949 ~ 9697915 (+)
G18491 NA other downstream 252608 9739796 ~ 9749880 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other downstream 311627 9798815 ~ 9799796 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other downstream 538630 10025818 ~ 10103461 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 1204702 10691890 ~ 10698540 (+)

Expression


Co-expression Network