zfand2a (zfand2a,LOC107703388,LOC107568938,LOC107674713,LOC107745591)


Basic Information

Item Value
gene id zfand2a
gene name zfand2a,LOC107703388,LOC107568938,LOC107674713,LOC107745591
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 16876854 ~ 16882081 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235685.1
CTTCACGCCCCCAGCGATGACATCTCAAAAAACGGCAGACGACTACAAAACCCCAAACACAGCGGCTGCGACAGCTCCGAGCGAAACGCGTTAGAAATCTTCCCGAGCTGGGACCAATATAAGATTTGCGGATAATTTCGTCCAGCAGCTGAGCTCTTTCACCACTGTGCCATGGAGTTTCCAGATCTCGGGGAGCACTGCTCGGAGAAGAGCTGCAAACGTCTCGATTTTCTTCCAATGAAATGTGATGCCTGTGAAGACATTTTCTGCAAAGACCACATAACTTATGCAAATCACAAGTGCACTTCATCGTACAAGAAGGATGTCCAGGTTCCTGTGTGTCCGTTGTGCAACACCCCCATTCCCATTAGAAGAGGGGAAATGCCGGACATCAAAGTTGGCGAACATATAGACAGAGACTGCAAATCTGACCCCGCTCAGAGGAAACGAAAAatatttacaaataaatgctccAAGGGCGGCTGTAAGCAGAAGGAAATGATCCGGGTCACGTGTGACCAGTGCCACTTGAACTACTGTCTCAAACATAGacatccactcgaccatgactGTAAGACTGACGGCAAGCCGGTCTCCAAATCAGGGCATGCTGCTTTAATGAGAGCTCAAAGCTCTTCTTCCAATAACGCGGCGGCCTCCTCCACTAGAGGGAGCTCTAGGTCCGTGTCTAATGGAGTGACTGGGAACACTAGACCTCAGAGCAGCAGTGCTCAGAGGATAAATACTTCTCCGATGGTGTCTCCAACAGCACAGAATGTAATTCCCCCATCAGCGTCATTTCAAGCCGGGCTGaCAGAGGAACAGGCCCTCCAGAGAGCATTAGAAATGTCACTCGCTGAATCTGCTCGGGCAAGCCAGCCAAGCCCTCAGGAGCAGGAGGATCTGGCCTTAGCTCAGGCTCTTGCTGCCAGTGAGGAAGAGTACAGGCGACAGCAGCAGAGACAACAGGGAGGAGTTTTCAAAGAGACCAGCTGCTGTCTGTCTTAATGTGAGGTGACCTGACCGACTATAATCTGCCTCAATCTGCACACGAGCACCAGTGATGTACCAGTGAGCTGCACATGTCTAGTGGATTTCAGAGTCCAGCATACGAAGCTTCTACTTCCCAAGTCAACACATCCGATGGCTGCCATGTTGTCGTTTTTCTGTTTCGCGTCACTCTGTACTGTGCTTCTTAGACGGGCAATTGTGCCGTTTCGGCGAGAGGTgcttcatgtaaatattttatataggtATCACGTTAAACTGTCAATCAATGTAGatgtcttttgaaataaattattttaaagtgtt
>XM_043235686.1
CTTCACGCCCCCAGCGATGACATCTCAAAAAACGGCAGACGACTACAAAACCCCAAACACAGCGGCTGCGACAGCTCCGAGCGAAACGCGTTAGAAATCTTCCCGAGCTGGGACCAATATAAGATTTGCGGATAATTTCGCTCGCTCAGAAGGTGATGCTCTGATTTGTGTACACAGTCCAGCAGCTGAGCTCTTTCACCACTGTGCCATGGAGTTTCCAGATCTCGGGGAGCACTGCTCGGAGAAGAGCTGCAAACGTCTCGATTTTCTTCCAATGAAATGTGATGCCTGTGAAGACATTTTCTGCAAAGACCACATAACTTATGCAAATCACAAGTGCACTTCATCGTACAAGAAGGATGTCCAGGTTCCTGTGTGTCCGTTGTGCAACACCCCCATTCCCATTAGAAGAGGGGAAATGCCGGACATCAAAGTTGGCGAACATATAGACAGAGACTGCAAATCTGACCCCGCTCAGAGGAAACGAAAAatatttacaaataaatgctccAAGGGCGGCTGTAAGCAGAAGGAAATGATCCGGGTCACGTGTGACCAGTGCCACTTGAACTACTGTCTCAAACATAGacatccactcgaccatgactGTAAGACTGACGGCAAGCCGGTCTCCAAATCAGGGCATGCTGCTTTAATGAGAGCTCAAAGCTCTTCTTCCAATAACGCGGCGGCCTCCTCCACTAGAGGGAGCTCTAGGTCCGTGTCTAATGGAGTGACTGGGAACACTAGACCTCAGAGCAGCAGTGCTCAGAGGATAAATACTTCTCCGATGGTGTCTCCAACAGCACAGAATGTAATTCCCCCATCAGCGTCATTTCAAGCCGGGCTGaCAGAGGAACAGGCCCTCCAGAGAGCATTAGAAATGTCACTCGCTGAATCTGCTCGGGCAAGCCAGCCAAGCCCTCAGGAGCAGGAGGATCTGGCCTTAGCTCAGGCTCTTGCTGCCAGTGAGGAAGAGTACAGGCGACAGCAGCAGAGACAACAGGGAGGAGTTTTCAAAGAGACCAGCTGCTGTCTGTCTTAATGTGAGGTGACCTGACCGACTATAATCTGCCTCAATCTGCACACGAGCACCAGTGATGTACCAGTGAGCTGCACATGTCTAGTGGATTTCAGAGTCCAGCATACGAAGCTTCTACTTCCCAAGTCAACACATCCGATGGCTGCCATGTTGTCGTTTTTCTGTTTCGCGTCACTCTGTACTGTGCTTCTTAGACGGGCAATTGTGCCGTTTCGGCGAGAGGTgcttcatgtaaatattttatataggtATCACGTTAAACTGTCAATCAATGTAGatgtcttttgaaataaattattttaaagtgtt
>XM_043235687.1
CTTCACGCCCCCAGCGATGACATCTCAAAAAACGGCAGACGACTACAAAACCCCAAACACAGCGGCTGCGACAGCTCCGAGCGAAACGCGTTAGAAATCTTCCCGAGCTGGGACCAATATAAGATTTGCGGATAATTTCGTCCAGCAGCTGAGCTCTTTCACCACTGTGCCATGGAGTTTCCAGATCTCGGGGAGCACTGCTCGGAGAAGAGCTGCAAACGTCTCGATTTTCTTCCAATGAAATGTGATGCCTGTGAAGACATTTTCTGCAAAGACCACATAACTTATGCAAATCACAAGTGCACTTCATCGTACAAGAAGGATGTCCAGGTTCCTGTGTGTCCGTTGTGCAACACCCCCATTCCCATTAGAAGAGGGGAAATGCCGGACATCAAAGTTGGCGAACATATAGACAGAGACTGCAAATCTGACCCCGCTCAGAGGAAACGAAAAatatttacaaataaatgctccAAGGGCGGCTGTAAGCAGAAGGAAATGATCCGGGTCACGTGTGACCAGTGCCACTTGAACTACTGTCTCAAACATAGacatccactcgaccatgactGTAAGACTGACGGCAAGCCGGTCTCCAAATCAGGGCATGCTGCTTTAATGAGAGCTCAAAGCTCTTCTTCCAATAACGCGGCGGCCTCCTCCACTAGAGGGAGCTCTAGGTCCGTGTCTAATGGAGTGACTGGGAACACTAGACCTCAGAGCAGCAGTGCTCAGAGGATAAATACTTCTCCGATGGTGTCTCCAACAGCACAGAATGTAATTCCCCCATCAGCGTCATTTCAAGCCGGGCTGaCAGAGGAACAGGCCCTCCAGAGAGCATTAGAAATGTCACTCGCTGAATCTGCTCGGGCAAGCCAGCCAAGCCCTCAGGAGCAGGAGGATCTGGCCTTAGCTCAGGCTCTTGCTGCCAGTGAGGAAGAGTACAGGCGACAGCAGCAGAGACAACAGGTAGCCAGAAAGCTTAGCAGTCAGTAGCATACTATGCTCACAGGACCTCACCTAGGGAGGAGTTTTCAAAGAGACCAGCTGCTGTCTGTCTTAATGTGAGGTGACCTGACCGACTATAATCTGCCTCAATCTGCACACGAGCACCAGTGATGTACCAGTGAGCTGCACATGTCTAGTGGATTTCAGAGTCCAGCATACGAAGCTTCTACTTCCCAAGTCAACACATCCGATGGCTGCCATGTTGTCGTTTTTCTGTTTCGCGTCACTCTGTACTGTGCTTCTTAGACGGGCAATTGTGCCGTTTCGGCGAGAGGTgcttcatgtaaatattttatataggtATCACGTTAAACTGTCAATCAATGTAGatgtcttttgaaataaattattttaaagtgtt
>XM_043235688.1
CTTCACGCCCCCAGCGATGACATCTCAAAAAACGGCAGACGACTACAAAACCCCAAACACAGCGGCTGCGACAGCTCCGAGCGAAACGCGTTAGAAATCTTCCCGAGCTGGGACCAATATAAGATTTGCGGATAATTTCGTCCAGCAGCTGAGCTCTTTCACCACTGTGCCATGGAGTTTCCAGATCTCGGGGAGCACTGCTCGGAGAAGAGCTGCAAACGTCTCGATTTTCTTCCAATGAAATGTGATGCCTGTGAAGACATTTTCTGCAAAGACCACATAACTTATGCAAATCACAAGTGCACTTCATCGTACAAGAAGGATGTCCAGGTTCCTGTGTGTCCGTTGTGCAACACCCCCATTCCCATTAGAAGAGGGGAAATGCCGGACATCAAAGTTGGCGAACATATAGACAGAGACTGCAAATCTGACCCCGCTCAGAGGAAACGAAAAatatttacaaataaatgctccAAGGGCGGCTGTAAGCAGAAGGAAATGATCCGGGTCACGTGTGACCAGTGCCACTTGAACTACTGTCTCAAACATAGacatccactcgaccatgactGTAAGACTGACGGCAAGCCGGTCTCCAAATCAGGGTGA

Function

symbol description
zfand2a Predicted to enable zinc ion binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein targeting to ER. Predicted to be active in endoplasmic reticulum. Orthologous to several human genes including ZFAND2B (zinc finger AN1-type containing 2B).

NR:

description
AN1-type zinc finger protein 2A-like isoform X2

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K24685 ZFAND2; AN1-type zinc finger protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235685.1 False 1314 mRNA 0.49 10 16876854 16882081
XM_043235686.1 False 1351 mRNA 0.49 10 16876854 16882081
XM_043235687.1 True 1369 mRNA 0.49 10 16876854 16882081
XM_043235688.1 False 609 mRNA 0.49 5 16876854 16879542

Neighbor

gene id symbol gene type direction distance location
si:dkey-43p13.5 LOC107753516,LOC107581781,LOC107745606,LOC107674624,LOC107576997 coding upstream 107411 16756053 ~ 16769443 (+)
ints1 ints1,LOC107572041,LOC107703394,LOC107674580 coding upstream 120945 16732362 ~ 16755909 (+)
tmem184a tmem184a,LOC107581701,LOC107572042,LOC107674661,LOC107745595 coding upstream 161177 16700421 ~ 16715677 (+)
LOC122341966 NA coding upstream 401665 16473822 ~ 16475189 (+)
LOC122342073 NA coding upstream 414164 16461318 ~ 16462690 (+)
galr2b galr2b,LOC107674614,LOC107564701,LOC107753547,LOC107703387,LOC108433115,LOC107745605 coding downstream 13888 16895969 ~ 16902970 (+)
LOC122341973 NA coding downstream 52052 16934133 ~ 16935519 (+)
trnat-cgu_1 NA coding downstream 123833 17005914 ~ 17005985 (+)
zc3h7a zc3h7a,LOC107727124,LOC107564690,LOC107674666,LOC107703382 coding downstream 142553 17024634 ~ 17037487 (+)
litaf litaf,LOC107727125,LOC107703380,LOC107674718 coding downstream 160968 17043049 ~ 17045292 (+)
G20744 NA non-coding upstream 89804 16786832 ~ 16787050 (+)
LOC122342129 NA non-coding upstream 279639 16596292 ~ 16597215 (+)
G20656 NA non-coding upstream 568836 16307798 ~ 16308018 (+)
G20647 NA non-coding upstream 584048 16292605 ~ 16292806 (+)
LOC122333245 NA non-coding upstream 996185 15879468 ~ 15880669 (+)
G20798 NA non-coding downstream 107131 16989212 ~ 17052645 (+)
LOC122341954 NA non-coding downstream 125314 17007395 ~ 17019304 (+)
G20797 snn,LOC107564698,LOC107703342 non-coding downstream 157110 17039191 ~ 17042404 (+)
G20801 NA non-coding downstream 175623 17057704 ~ 17062823 (+)
G20829 NA non-coding downstream 192541 17074622 ~ 17074824 (+)
micall2a micall2,micall2a,LOC107703317,LOC107745593,LOC107568921,LOC107674716 other upstream 92043 16770545 ~ 16784811 (+)
LOC122331507 psmg3,LOC107703392 other upstream 177372 16690703 ~ 16699482 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other upstream 669008 16179620 ~ 16207846 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other upstream 1132660 15706936 ~ 15744194 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other upstream 1596741 15269800 ~ 15280113 (+)
nsmce1 nsmce1 other downstream 230967 17113048 ~ 17117041 (+)
LOC122341316 NA other downstream 255849 17137930 ~ 17200630 (+)
G20950 igfals,LOC107703367,LOC107719182,LOC107674637,LOC107565761,LOC107710645 other downstream 837101 17719182 ~ 17723423 (+)
mrtfbb LOC107725018,LOC107572174,LOC107703365,LOC107674669 other downstream 988096 17870177 ~ 17901491 (+)
polr3k polr3k,LOC107703329 other downstream 1022503 17904584 ~ 17906643 (+)

Expression


Co-expression Network