G18815


Basic Information

Item Value
gene id G18815
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10159147 ~ 10164994 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21128
GTTGAATTGCGCCCAGGACACTGGCATATTGCTGAAATCTTCAGAAATGTCTGGCTGGTCAAAGATCTTCTGTGCGAGAAAGTGAAGGTTGTATCTGTCCAAGCCCCGCTGCGTTTGCACCTCAGACATGAACTTACTGCTAAGAGCTTCACACATCTGCTTCCAGGGCACACGGTCCGGAATGACGAACGGTATCCTGTTCTGAAATCAGCACAGCACAGGGCACACGTTGCCTATTTGTTCACAAAACACTGAAGAGGGTCGACAACAGGAAAAAGAGCTGTCGTGTGGTTGTTCTGTGCTACTCACAGGCTCAGAGAAGGCGCAGTCCCATATGATGGTCGCCATAGCATTGATTTCCTGACTACCATGCACAATTACAACCACAGGAAGAGAGATTGTCTGAATGCCGTAAGGGCTCTCACAGCCTGTGATGGTAATTTCTGTGGTGAACAACAAAGCAAACTTTTCCTCCGTCACTGACTCTGAGCCCTTCCTGTCAGCTCGTTTGATCTTCCTTATGGACATGTTTCTAAAGGTAGCACATGTGCTCTTGCTGGAGGTGTTGTGTTCTAAGATGGCCGTGCTGTTGATAAGTTCTCCAACATTTTCATTGGGCACGATGCCTTGACCCAGGTTTCTTGCTTGGGCCTCAGTAATAATCTGCGCTTTCAATACGACGGGTTTTCCAGGAGCCATCTTCTCTCCCAGCAGATGCCGTACAGTGGTGGAAAACTTGGATTGGGTTTTGATGACTTGGGGAGGTTGCTTATCTACTACCAATGAATTCTGTACGAGAGTCTGAAGCAGACATGCCAGGCTTTCCTCCAATGTTTGAAACTGTTCACCCCCTCCGTGGTCCCTCTTCACCAACATGAGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21128 True 882 lncRNA 0.35 5 10159147 10164994

Neighbor

gene id symbol gene type direction distance location
CI01000001_10150798_10152858 MIPA coding upstream 6209 10150373 ~ 10152938 (+)
CI01000001_10141190_10146911 PTGES3, PTGES3A coding upstream 11089 10141190 ~ 10148058 (+)
CI01000001_10093069_10104108 RND1B, RND1, RND1A coding upstream 53448 10092902 ~ 10105699 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding upstream 77968 10072627 ~ 10081179 (+)
CI01000001_09946111_09958162 NA coding upstream 200901 9944120 ~ 9958246 (+)
CI01000001_10321783_10325266 NA coding downstream 156653 10321647 ~ 10325305 (+)
CI01000001_10328133_10329110 NA coding downstream 163046 10328040 ~ 10329110 (+)
CI01000001_10395420_10396473 NA coding downstream 229857 10394851 ~ 10396705 (+)
CI01000001_10420931_10426716 NA coding downstream 255324 10420318 ~ 10427147 (+)
CI01000001_10525795_10530510 WNT1 coding downstream 358268 10523262 ~ 10530543 (+)
G18851 NA non-coding upstream 26394 10132550 ~ 10132753 (+)
G18850 NA non-coding upstream 26803 10132128 ~ 10132344 (+)
G18840 NA non-coding upstream 38537 10120312 ~ 10120610 (+)
G18839 NA non-coding upstream 39891 10119051 ~ 10119256 (+)
G18816 NA non-coding upstream 70637 10087959 ~ 10088510 (+)
G18813 NA non-coding downstream 5957 10170951 ~ 10180836 (+)
G18864 NA non-coding downstream 37507 10202501 ~ 10209817 (+)
G18870 NA non-coding downstream 46235 10211229 ~ 10211446 (+)
G18873 NA non-coding downstream 58885 10223879 ~ 10260714 (+)
G18890 NA non-coding downstream 59932 10224926 ~ 10225528 (+)
CI01000001_09435836_09436037 NA other upstream 721084 9435836 ~ 9436373 (+)
G17354 NA other upstream 918470 9234463 ~ 9240677 (+)
G17353 NA other upstream 930288 9216022 ~ 9228859 (+)
G17234 NA other upstream 2126664 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 2618561 7531541 ~ 7540586 (+)
G18896 NA other downstream 74906 10239900 ~ 10241492 (+)
G18872 NA other downstream 106152 10271146 ~ 10281369 (+)
G18937 NA other downstream 309990 10474984 ~ 10476389 (+)

Expression


Co-expression Network