prpsap2 (prpsap2,LOC107737786,LOC107581734,LOC107654541,LOC103393631)


Basic Information

Item Value
gene id prpsap2
gene name prpsap2,LOC107737786,LOC107581734,LOC107654541,LOC103393631
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15293378 ~ 15300967 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235767.1
TTGGGTATTTCTCGAGGGTAGCAAAGTTCACATTGTTGCAAGTGATACAGTAAACCACGCGAAGGGATCGATTAAAAGATCAAACTGGAAGTGTCTGGTGTTAAACTAACAGTGTGCCTGTGGTCCTGTTGATAGGAAGGGCTCAGCAGTGCCTGGGTGCCCAGGGAGCCACTGCCTGAGTCCCTAGAGGTAGAGACCAAACCACAGGACATGAGTGCTGCCAAAGGAGGCCTGGTCATCTTCACGGCCAACTCCAACCCCTCCAGCAGAGAGCTAGGGAGGAGGATAGCCGAGCGGTTGGGTGTGGAACTTGGGAAGGTGCAGGTCTATCAAGAAGCTAACAGAGAAACACGGGTCCAAATCGAAGAGTCTGTGCGTGGCAAAGATGTTTTCATCATCCAAACGGTCTCCAAAGATGTTAACACCACCATCATGGAGCTGCTCATTATGGTGTATGCCTGCAGGACGTCCTGTGCTCGAAACATCATTGGCGTCATTCCCTATTTCCCCTACAGCAAGCAGTGCAAGATGCGGAAGagaggctccatcgtctctaaACTACTTGCCTCAATGATGTGTAAAGCAGGTCTGACTCATCTCATTACAATGGATTTGCATCAAAAGGAAATCCAGGGTTTCTTCAACATTCCAGTGGACAATCTGCGGGCCTCGCCATTTTTACTACAATATATACAGGAAGAAattcCTGACTACAGAAATGCTGTAATTGTGGCCAAATCTCCAGCATCAGCTAAAAGGGCCCAGTCATTCGCGGAAAGGTTACGGCTGGGCATCGCGGTAATCCACGGTGAAGCCCAGGATGCTGAATCAGACCTAGTGGATGGACGTCATTCCCCACCCACTGTCAAAAACATTGGCGCCATTCATCCAAGCCTAGAGATACCATTGCTAATTCCCAAAGAAAAACCCCCAATAACTGTGGTTGGAGATGTAGGTGGACGAATTGCCATCATTGTGgatGACATCATTGACGATGTCGACAGTTTTCTCGCAGCAGCCGAAACTTTGAAAGAAAGAGGCGCTTACAAGATCTTTGTCATGGCCACTCATGGAATCCTCTCCTCAGATGCCCCTCGGCTAATAGAGGAGTCCGCCATAGATGAGGTCGTTGTCACCAACACCGTTCCACACGAGATCCAAAAACTCCAGTGTCCCAAGATCAAGACGGTCGATATCAGCATGATCTTGTCAGAAGCCATTCGCCGCATCCACAATGGAGAATCAATGTCTTACCTGTTTCGTAATATCGGCATGGATGACTGACAGGCCCGTGTGCATTCAGTCATAACATGCGCACAGAGGTCAAGACTTTCTGTCCCTATTGCCTGTATCtttaccagtttttttttttttttttttttttggtctctcaTTGTACgtgtaatgttttgaaaaattgtgCACTCAGAACCTGGATGTTCTACAATGCTGATGTGAAAATCTTCAGAGGACTGAAGTGCAGGGATGCTCCACCTCTTGATCAGAAATATTGGCACTTTTATTTAAGATTTGAAGGACTACTGGATGTTAAAATTGTCTTCGGTTCTTTTAGTCGTAGCtctgcttaatttatttttatttttgtaataattaaagaATGAACGACTCCACTGTGTGGCCAACAATTCCAAAATGTTACCATAAATCTATGCTGTGACATATCAGTGTCAGTGCCTCATGACTTTGTGTAATTATTGTGCCACTAGTTGtttctgtgtatttgtgtggTAATGCTGGGTAGTGATGttaaaatcaataattatttaattcaagGCTAAATAGATGCAAGGTACATTCTTAGACTTCAACACAGCGCTTAAGATTTAAAGCTTAATGTGCTTGATTGAATGTTTTTCCTGCTAGATTCTTCTACTAACACCTCAGCGTGTGAaagcttgtgtttgtttttgccaaTAACGGGACTATGGAAGCATATTTGCCTCATAAATGTGGTCATAGTGGCCAGAGTTTTTAAGTATCTTGCCTCTGAGAACTTGACTtctcattttcaaatgaaatgcaggGTTTTTGTTATGTAACTAATATTTCAggcttttgtatttattcacagCACTTGATGACAATGAATAAACAACTTAAAGACTA
>XM_043235768.1
CGGCCATCTTGGGTATTTCTCGAGGGTAGCAAAGTTCACATTGTTGCAAGTGATACAGTAAACCACGCGAAGGGATCGATTAAAAGATCAAACTGGAAGGGCTCAGCAGTGCCTGGGTGCCCAGGGAGCCACTGCCTGAGTCCCTAGAGGTAGAGACCAAACCACAGGACATGAGTGCTGCCAAAGGAGGCCTGGTCATCTTCACGGCCAACTCCAACCCCTCCAGCAGAGAGCTAGGGAGGAGGATAGCCGAGCGGTTGGGTGTGGAACTTGGGAAGGTGCAGGTCTATCAAGAAGCTAACAGAGAAACACGGGTCCAAATCGAAGAGTCTGTGCGTGGCAAAGATGTTTTCATCATCCAAACGGTCTCCAAAGATGTTAACACCACCATCATGGAGCTGCTCATTATGGTGTATGCCTGCAGGACGTCCTGTGCTCGAAACATCATTGGCGTCATTCCCTATTTCCCCTACAGCAAGCAGTGCAAGATGCGGAAGagaggctccatcgtctctaaACTACTTGCCTCAATGATGTGTAAAGCAGGTCTGACTCATCTCATTACAATGGATTTGCATCAAAAGGAAATCCAGGGTTTCTTCAACATTCCAGTGGACAATCTGCGGGCCTCGCCATTTTTACTACAATATATACAGGAAGAAattcCTGACTACAGAAATGCTGTAATTGTGGCCAAATCTCCAGCATCAGCTAAAAGGGCCCAGTCATTCGCGGAAAGGTTACGGCTGGGCATCGCGGTAATCCACGGTGAAGCCCAGGATGCTGAATCAGACCTAGTGGATGGACGTCATTCCCCACCCACTGTCAAAAACATTGGCGCCATTCATCCAAGCCTAGAGATACCATTGCTAATTCCCAAAGAAAAACCCCCAATAACTGTGGTTGGAGATGTAGGTGGACGAATTGCCATCATTGTGgatGACATCATTGACGATGTCGACAGTTTTCTCGCAGCAGCCGAAACTTTGAAAGAAAGAGGCGCTTACAAGATCTTTGTCATGGCCACTCATGGAATCCTCTCCTCAGATGCCCCTCGGCTAATAGAGGAGTCCGCCATAGATGAGGTCGTTGTCACCAACACCGTTCCACACGAGATCCAAAAACTCCAGTGTCCCAAGATCAAGACGGTCGATATCAGCATGATCTTGTCAGAAGCCATTCGCCGCATCCACAATGGAGAATCAATGTCTTACCTGTTTCGTAATATCGGCATGGATGACTGACAGGCCCGTGTGCATTCAGTCATAACATGCGCACAGAGGTCAAGACTTTCTGTCCCTATTGCCTGTATCtttaccagtttttttttttttttttttttttggtctctcaTTGTACgtgtaatgttttgaaaaattgtgCACTCAGAACCTGGATGTTCTACAATGCTGATGTGAAAATCTTCAGAGGACTGAAGTGCAGGGATGCTCCACCTCTTGATCAGAAATATTGGCACTTTTATTTAAGATTTGAAGGACTACTGGATGTTAAAATTGTCTTCGGTTCTTTTAGTCGTAGCtctgcttaatttatttttatttttgtaataattaaagaATGAACGACTCCACTGTGTGGCCAACAATTCCAAAATGTTACCATAAATCTATGCTGTGACATATCAGTGTCAGTGCCTCATGACTTTGTGTAATTATTGTGCCACTAGTTGtttctgtgtatttgtgtggTAATGCTGGGTAGTGATGttaaaatcaataattatttaattcaagGCTAAATAGATGCAAGGTACATTCTTAGACTTCAACACAGCGCTTAAGATTTAAAGCTTAATGTGCTTGATTGAATGTTTTTCCTGCTAGATTCTTCTACTAACACCTCAGCGTGTGAaagcttgtgtttgtttttgccaaTAACGGGACTATGGAAGCATATTTGCCTCATAAATGTGGTCATAGTGGCCAGAGTTTTTAAGTATCTTGCCTCTGAGAACTTGACTtctcattttcaaatgaaatgcaggGTTTTTGTTATGTAACTAATATTTCAggcttttgtatttattcacagCACTTGATGACAATGAATAAACAACTTAAAGACTA

Function

symbol description
prpsap2 Predicted to enable ribose phosphate diphosphokinase activity. Predicted to be involved in 5-phosphoribose 1-diphosphate biosynthetic process and purine nucleotide biosynthetic process. Predicted to act upstream of or within nucleoside metabolic process and nucleotide biosynthetic process. Predicted to be part of ribose phosphate diphosphokinase complex. Predicted to be active in cytoplasm. Orthologous to human PRPSAP2 (phosphoribosyl pyrophosphate synthetase associated protein 2).

NR:

description
PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein 2 isoform X1

GO:

id name namespace
GO:0009165 nucleotide biosynthetic process biological_process
GO:0004749 ribose phosphate diphosphokinase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235767.1 True 2127 mRNA 0.43 11 15293386 15300967
XM_043235768.1 False 2087 mRNA 0.44 11 15293378 15300967

Neighbor

gene id symbol gene type direction distance location
cln3 cln3,LOC107591583,LOC107737814,LOC107720039,LOC107674677,LOC107654539,LOC107581771 coding upstream 469 15287608 ~ 15292909 (+)
aldoaa aldoaa,aldoab,LOC107720037,LOC107674678,LOC107581735,LOC107689930 coding upstream 8353 15280728 ~ 15285025 (+)
zgc:100868 LOC107654462,LOC107738142,LOC107581796 coding upstream 36343 15250534 ~ 15257035 (+)
tmem98 tmem98,LOC107674611,LOC107720031,LOC107738157,LOC107654470 coding upstream 194281 15092956 ~ 15099097 (+)
kcnj19a si:dkey-106c17.3,LOC107654469,LOC107581800,LOC107737881,LOC107674737,LOC107720030,LOC108432058 coding upstream 242941 15029823 ~ 15050437 (+)
epn2 epn2,LOC107654543,LOC107674690,LOC107720043,LOC107591621 coding downstream 18915 15319882 ~ 15338761 (+)
cacna1ha cacna1h,cacna1ha,LOC107674675,LOC107703431,LOC107592392,LOC108430574 coding downstream 67833 15368800 ~ 15455523 (+)
ccdc97 ccdc97,LOC107592724,LOC107738100,LOC107720089 coding downstream 156160 15457127 ~ 15461711 (+)
gfer gfer,LOC107703347,LOC107581791,LOC107720049,LOC107674715 coding downstream 237938 15538905 ~ 15541934 (+)
syngr3a syngr3a,LOC107703346,LOC107581789,LOC107674602,LOC107591648,LOC107720048 coding downstream 241155 15542122 ~ 15547875 (+)
G20269 NA non-coding upstream 154478 15129681 ~ 15138900 (+)
G20188 NA non-coding upstream 300341 14990229 ~ 14993037 (+)
G20179 NA non-coding upstream 303386 14972299 ~ 14989992 (+)
G20183 NA non-coding upstream 321717 14971012 ~ 14971661 (+)
G20180 NA non-coding upstream 324093 14920245 ~ 14969285 (+)
G20415 NA non-coding downstream 286245 15587212 ~ 15588809 (+)
LOC122334397 NA non-coding downstream 413765 15714732 ~ 15727870 (+)
LOC122334400 NA non-coding downstream 419280 15720247 ~ 15721303 (+)
G20452 LOC107674632,LOC107720067,LOC107591813,LOC107748300 non-coding downstream 561046 15862013 ~ 15864962 (+)
G20465 NA non-coding downstream 571835 15872802 ~ 15873925 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other upstream 13265 15269800 ~ 15280113 (+)
G20286 LOC107581737,LOC107654534 other upstream 108505 15149112 ~ 15184873 (+)
G20295 plcd3,plcd3a,LOC107674588,LOC107581738,LOC107654535,LOC107591554,LOC108432051 other upstream 124120 15168338 ~ 15169258 (+)
G20172 rps11,LOC107674708 other upstream 621810 14664919 ~ 14671568 (+)
G20167 NA other upstream 670520 14618994 ~ 14622858 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other downstream 405969 15706936 ~ 15744194 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other downstream 878653 16179620 ~ 16207846 (+)
LOC122331507 psmg3,LOC107703392 other downstream 1389736 16690703 ~ 16699482 (+)
micall2a micall2,micall2a,LOC107703317,LOC107745593,LOC107568921,LOC107674716 other downstream 1469578 16770545 ~ 16784811 (+)
nsmce1 nsmce1 other downstream 1812081 17113048 ~ 17117041 (+)

Expression


Co-expression Network