mpp2a (mpp2a,LOC107582977,LOC107758486,LOC107737744,LOC108434916,LOC106600860,LOC106607467)


Basic Information

Item Value
gene id mpp2a
gene name mpp2a,LOC107582977,LOC107758486,LOC107737744,LOC108434916,LOC106600860,LOC106607467
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12477842 ~ 12490062 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235771.1
GTGGGTCCCACCTACTGAGACGTTTGAGCGTTGCCCCTTTATGCCTACGCAACGGCTAGACTCTGATTTGATGCTTTGTAGCGGTTCAGACACCTCTCACATAATCAAAACAACGTTACGAAGCGTGTACGATACGGGAAAAGATTTCAAACATCATGCCTGTGGCAGCCACCGGCACAGAGCATGCAGTGCCGCAGGTGCTGGACACTCTGAGTGACAGCGCCAGCTCCACCACTGCCAATGACCTGGACCTCATCTTCCTCAAGGGCATCATGGAGAGCCCAGTGAGCGCAGAGAGTTTGGAGGAGACACGACTGGAGGCCGTGAGGGACAATAATGTGGAGTTGGTGCAGgacatcctgagagagctgaGCCCCTTCACGCACCGCAGCAACACCGCCGCAGAGCTGTCCCGCATTCTCAACCAGCCGCACTTCCAGTCTCTGCTGGAGACCCACGACTCGGTGGCCTCTCAGACGTGTGAGACTCCGCCCTCGAGCCCCTGCGCTTTCATGGAGCCGCCCATCAACCCTGCACCGGTGCCAGCTGATGCCATACGCATGGTGGGCATCCGCAAAGTGGCTGGAGAGCATTTGGGTGTGACGTTCCGTATTGAGAACGGAGAGCTGGTGATCGCCCGCATTCTCCACGGGGGGATGATCGACCAGCAGGGTCTGCTCCACGTGGGGGACATCATCAAAGAGGTGAACGGGCGAGAGGTGGGTGACGACCCTCGTGTGCTGCAGGAGATGCTGCAGGAGGCCAGCGGCAGTGTGGTGCTCAAAATACTTCCCAGCTACCAGGAGCCGCATCCCCCCAGACAGGTTTTTGTGAAGTGTCACTGTGATTATGACCCTGCCAATGACAACCTCATCCCGTGCAAAGAGGCGGCACTGCAGTTCTCCAGCGGAGACATTCTGCAGATTGTTAACCAGGAAGACGTGAACTGGTGGCAGGCACGTCATGTAGAGGGAGGCAGCGCTGGCCTGATTCCCAGTCAACTTCTGGAGGAAAAGAGGAAAGCTTTTGTGAAGAAAGATGTTGATCTTTCACCAGCAGCCAATCTATGTACTGGAATGGTTggcaagaagaagaagaaaatgatGTATCTAACTACAAAAAATGCAgATTTCGACAGGCACGAGTTACTGATCTATGAGGAGGTGGCGAAAGTCCCACCTTTTCGCAGGAAGACGCTGGTTCTGATTGGTGCCCCTGGAGTGGGCCGACGGAGTCTGAAGAACAAGTTGCTCGTGTCAGACCCTCAGCACTACGGCACCACCGTCCCCTACACCTCCAGGAAGGCCAAATCAGCAGACAGAGAGAACATGATGTATGCCTTCACATCCCGGAGTAAGATGGAAGCCGATATTAAAGCTGGCCGTTATCTTGAACATGGCGAATATGACGGTAACCTCTACGGCACCAAGATCGACTCCATCCATGAAGTAGTGGAGGCCGGACGCATCTGTATCCTGGACGTTAACCCCCAGtcCCTAAAAGTCCTCAGGACATCAGAGTTTTTGCCGTATGTGGTGTTCATCAAAGCCCCGGAGTTTGAGGTGCTGAAGGCCATGAACAGATCTGGGGTGGAGGCGGGAGTGACCAAACGCAGAACAGACGCAGAGCTGAAGAGGACGGTGGATGAGAGCGACAAGATTCAGAGAGTGTACGGACACTACTTCGACCTCACCATAGTAAACGATGATTTGGAAGAGGCTTACAGGAACCTCAAATCCTCCTTAGAGAAGTTAAAGGGAGCTCAGCAGTGGGTTCCGGTCGGGTGGGTGTTTTAGAGCTCAGCACAGCAACTAGTGGATGATTCATGTGACACTTTATACCAGTGTTAACTGGTTTAAATCATCAACCTCGTGCCAAGGGTGTACACTGATCAGAGAGcttatatgagtgtgtgtgtgtgagtgtgtgaaatCACCATTTACCCTTTAAATACAGCAAACTGATACAAACCTCAGAAACAAGCTACAATCTCATCTTTTTGTTTACAGTAAACATTCTAGTTTCAGTTCAAATGGTTTTTTGAAATCTtagatcttttttattttattttacacacattctttaaaaattcaAGTTCAAAATAATAGTCTTTCTATAGtcaaagaaaaatctaaaaacaaaacaaaacaaaactgtaaagcAAGACTATATTTTGCAGAATATAGCCTGAATCTATAATTTATGATgataaatagtgtttttttgttgtttgtttaaacgtaaccttttcaaaaggttgttagatttatttagtggaatcaaaatcatttttcaatctcaatattttaagaaattaatacttaacagagtaaaa
>XM_043235772.1
GTGGGTCCCACCTACTGAGACGTTTGAGCGTTGCCCCTTTATGCCTACGCAACGGCTAGACTCTGATTTGATGCTTTGTAGCGGTTCAGACACCTCTCACATAATCAAAACAACGTTACGAAGCGTGTACGATACGGGAAAAGATTTCAAACATCATGCCTGTGGCAGCCACCGGCACAGAGCATGTGCCGCAGGTGCTGGACACTCTGAGTGACAGCGCCAGCTCCACCACTGCCAATGACCTGGACCTCATCTTCCTCAAGGGCATCATGGAGAGCCCAGTGAGCGCAGAGAGTTTGGAGGAGACACGACTGGAGGCCGTGAGGGACAATAATGTGGAGTTGGTGCAGgacatcctgagagagctgaGCCCCTTCACGCACCGCAGCAACACCGCCGCAGAGCTGTCCCGCATTCTCAACCAGCCGCACTTCCAGTCTCTGCTGGAGACCCACGACTCGGTGGCCTCTCAGACGTGTGAGACTCCGCCCTCGAGCCCCTGCGCTTTCATGGAGCCGCCCATCAACCCTGCACCGGTGCCAGCTGATGCCATACGCATGGTGGGCATCCGCAAAGTGGCTGGAGAGCATTTGGGTGTGACGTTCCGTATTGAGAACGGAGAGCTGGTGATCGCCCGCATTCTCCACGGGGGGATGATCGACCAGCAGGGTCTGCTCCACGTGGGGGACATCATCAAAGAGGTGAACGGGCGAGAGGTGGGTGACGACCCTCGTGTGCTGCAGGAGATGCTGCAGGAGGCCAGCGGCAGTGTGGTGCTCAAAATACTTCCCAGCTACCAGGAGCCGCATCCCCCCAGACAGGTTTTTGTGAAGTGTCACTGTGATTATGACCCTGCCAATGACAACCTCATCCCGTGCAAAGAGGCGGCACTGCAGTTCTCCAGCGGAGACATTCTGCAGATTGTTAACCAGGAAGACGTGAACTGGTGGCAGGCACGTCATGTAGAGGGAGGCAGCGCTGGCCTGATTCCCAGTCAACTTCTGGAGGAAAAGAGGAAAGCTTTTGTGAAGAAAGATGTTGATCTTTCACCAGCAGCCAATCTATGTACTGGAATGGTTggcaagaagaagaagaaaatgatGTATCTAACTACAAAAAATGCAgATTTCGACAGGCACGAGTTACTGATCTATGAGGAGGTGGCGAAAGTCCCACCTTTTCGCAGGAAGACGCTGGTTCTGATTGGTGCCCCTGGAGTGGGCCGACGGAGTCTGAAGAACAAGTTGCTCGTGTCAGACCCTCAGCACTACGGCACCACCGTCCCCTACACCTCCAGGAAGGCCAAATCAGCAGACAGAGAGAACATGATGTATGCCTTCACATCCCGGAGTAAGATGGAAGCCGATATTAAAGCTGGCCGTTATCTTGAACATGGCGAATATGACGGTAACCTCTACGGCACCAAGATCGACTCCATCCATGAAGTAGTGGAGGCCGGACGCATCTGTATCCTGGACGTTAACCCCCAGtcCCTAAAAGTCCTCAGGACATCAGAGTTTTTGCCGTATGTGGTGTTCATCAAAGCCCCGGAGTTTGAGGTGCTGAAGGCCATGAACAGATCTGGGGTGGAGGCGGGAGTGACCAAACGCAGAACAGACGCAGAGCTGAAGAGGACGGTGGATGAGAGCGACAAGATTCAGAGAGTGTACGGACACTACTTCGACCTCACCATAGTAAACGATGATTTGGAAGAGGCTTACAGGAACCTCAAATCCTCCTTAGAGAAGTTAAAGGGAGCTCAGCAGTGGGTTCCGGTCGGGTGGGTGTTTTAGAGCTCAGCACAGCAACTAGTGGATGATTCATGTGACACTTTATACCAGTGTTAACTGGTTTAAATCATCAACCTCGTGCCAAGGGTGTACACTGATCAGAGAGcttatatgagtgtgtgtgtgtgagtgtgtgaaatCACCATTTACCCTTTAAATACAGCAAACTGATACAAACCTCAGAAACAAGCTACAATCTCATCTTTTTGTTTACAGTAAACATTCTAGTTTCAGTTCAAATGGTTTTTTGAAATCTtagatcttttttattttattttacacacattctttaaaaattcaAGTTCAAAATAATAGTCTTTCTATAGtcaaagaaaaatctaaaaacaaaacaaaacaaaactgtaaagcAAGACTATATTTTGCAGAATATAGCCTGAATCTATAATTTATGATgataaatagtgtttttttgttgtttgtttaaacgtaaccttttcaaaaggttgttagatttatttagtggaatcaaaatcatttttcaatctcaatattttaagaaattaatacttaacagagtaaaa

Function

symbol description
mpp2a Orthologous to human MPP2 (membrane palmitoylated protein 2).

NR:

description
PREDICTED: MAGUK p55 subfamily member 2 isoform X1

GO: NA

KEGG:

id description
K24048 MPP2_6; MAGUK p55 subfamily member 2/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235771.1 True 2335 mRNA 0.48 13 12477842 12490062
XM_043235772.1 False 2332 mRNA 0.48 13 12477842 12490062

Neighbor

gene id symbol gene type direction distance location
pyya pyya,LOC107689636,LOC107554138,LOC107583099,LOC107758485,LOC107695175 coding upstream 570 12474069 ~ 12477272 (+)
hspb9 LOC107758484,LOC107583100,LOC107695165,LOC107689635,LOC107554137,LOC107737748 coding upstream 20933 12456009 ~ 12456909 (+)
rusf1 zgc:162613,LOC107729465,LOC107658510,LOC107737752,LOC107554129,LOC107689643 coding upstream 201483 12272640 ~ 12276359 (+)
prr14 LOC107729463,LOC107658509,LOC107582987 coding upstream 209749 12259476 ~ 12268093 (+)
cd2bp2 cd2bp2,LOC107582988,LOC107729467,LOC107554127,LOC107737770,LOC107683307 coding upstream 218662 12253858 ~ 12259180 (+)
LOC122329583 nacc1,LOC107690702,LOC103910274,LOC107737738,LOC107689628,LOC107554144,LOC107723200,LOC103025552 coding downstream 171619 12661681 ~ 12676663 (+)
ier2a LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 coding downstream 188334 12678396 ~ 12679757 (+)
alkbh7 NA coding downstream 280510 12770572 ~ 12772182 (+)
LOC122332168 gtf2f1,LOC107737737 coding downstream 405264 12895326 ~ 12900216 (+)
LOC122332118 alkbh7,LOC107723204,LOC107690706 coding downstream 482415 12972477 ~ 12974627 (+)
G19287 NA non-coding upstream 249322 12227935 ~ 12228520 (+)
G19274 NA non-coding upstream 342885 12132629 ~ 12134957 (+)
G19263 NA non-coding upstream 359067 12118538 ~ 12118775 (+)
G19257 NA non-coding upstream 403339 12074231 ~ 12074503 (+)
G19255 NA non-coding upstream 404769 12072719 ~ 12073073 (+)
G19579 NA non-coding downstream 191196 12681258 ~ 12681565 (+)
G19575 LOC107690704 non-coding downstream 192756 12682818 ~ 12686371 (+)
G19656 NA non-coding downstream 507155 12997217 ~ 13056733 (+)
G19629 ighv4-5 non-coding downstream 515748 13005810 ~ 13096854 (+)
G19627 NA non-coding downstream 570098 13060160 ~ 13061606 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other upstream 162796 12303364 ~ 12315046 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other upstream 227845 12232427 ~ 12249997 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other upstream 359903 12114048 ~ 12117939 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other upstream 376990 12092603 ~ 12100852 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other upstream 428420 12027149 ~ 12049422 (+)
G19326 NA other downstream 21864 12511926 ~ 12513721 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other downstream 29775 12519837 ~ 12528803 (+)
LOC122332158 LOC107583070,LOC107737766 other downstream 345319 12835381 ~ 12987913 (+)
si:dkey-204f11.64 LOC105898698 other downstream 622415 13112477 ~ 13114856 (+)
rbbp6 rbbp6,LOC107689611,LOC107710004,LOC107590402,LOC107601255,LOC107688097,LOC107720072 other downstream 1208475 13698537 ~ 13710865 (+)

Expression


Co-expression Network