ubald1b (ubald1b,LOC107754052,LOC107672511,LOC107670507,LOC107596822,LOC107587929)


Basic Information

Item Value
gene id ubald1b
gene name ubald1b,LOC107754052,LOC107672511,LOC107670507,LOC107596822,LOC107587929
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9675218 ~ 9678951 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235774.1
CGCTAAGTGGGACGGTTGAACTcacaacatttcttttttgtttctagTCGGCCAGGTTGATGTTTGAGTGCGGCTTTTTGGGAAGACTGCAAGCTGAAACTTCGCAACTGACGAAATCGCAGGGGTTTTCTTAAATATGGACGAGCTTAGGCGTCAAGTTATGATAAACCAGTTCGTTCTCACAGCCGGATGTGCGGCAGATCAAGCAAAGCAGCTTCTACAAGCGTCACACTGGCAGTTTGAGACTGCTCTCAGTACATTTTTCCAAGAGGCCAATATTCCTTACGGCCATCAAATGATGTGCACTCCAGCCAACACACCGGCGACGCCCCCCAACTTCCCAGATGCCCTAGCCATGTTCTCCCGGCTTAAAGCCTCAGAGAGCTTCGGAAACAGCAGTCCCATCGCTTCTATGGCCACGTCACCAGCTCCTCACACCAACTGGGCCATGAGCCCCCCGGCAACCCCTGGTCACCAGGGTCGATGGACTCCAGGTCAGCTCATGCCCCAAACGCCCTCAGCAGGCTGGCCCGCGGCTGTGACCCAGCAAGCCTCCGCCGAGCACGCTAGCATCGTCATGGAGGCCGAGAGATAGAGACTGCTTCGATTAGCCATCACACCTtacaggaagaggaggatggaCCTTCCTCTTGGAGACTTGGGCAGTCGTGGAGGTAAAACGGTGCGAAGAGGTCGCTGTGGAGGAACGCCGCGTGGCCTCTTCTCTGAGGTCACGGGAGATCTGGgagttttttaaaatgcttttcttttggcGATAACCAAATAAAGATGGACAGAATGAGTAATCGTGTAGCATATTCACAGAAAACCTCAGACAAATGAATGTGTTGCTGAATAATGTCAGTTCTCAAGTAATGGTGAATACTCTATTTTGCACTGTGCACTAAACAATAGTTACTCGCCGTCGTGTCATTTTAAAcctattaaaacttaattttgtggacaaaatgctttttttgcatttcttcttGTTCCACAGAGAGTTAtaagggtttggaatgacatcagggtgagtgaatgattgatttttatttttttggctgaacGTCTCTTTATTCAACAGGTTTACTGTAGAAAAAGGACTGGTCTGTAATTTTTCGACTTCTTTATGACTTTGCAATGAACCAAATtggcattttatattaaaataatggtaTAAGAAGTGTTTTATACCCAGAACGTTGGACTCTCTCCGCACTTGCAGAACATTTGTTTTATCTCAAATCcctatttaaatatgatttctttTCACCGATCATCTCCCTCTAACTGTGTTCACACTGCCTCCACAATATTTGTGGACTATGTGATGGTTATTATTTCCTGtttgtagtgtttttaaataaatattgtgtatatatattgcaaa

Function

symbol description
ubald1b Orthologous to human UBALD1 (UBA like domain containing 1).

NR:

description
PREDICTED: UBA-like domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235774.1 True 1390 mRNA 0.45 3 9675218 9678951

Neighbor

gene id symbol gene type direction distance location
s1pr2 s1pr2,LOC107711272,LOC107587933,LOC107672500,LOC107596814,LOC107754042 coding downstream 45306 9607284 ~ 9629912 (-)
dnmt1 dnmt1,LOC107587934,LOC107672482,LOC107670489 coding downstream 70205 9592315 ~ 9605013 (-)
angptl6 LOC107672431,LOC107587937,LOC107711167 coding downstream 97608 9569453 ~ 9577610 (-)
icam5 NA coding downstream 105891 9563751 ~ 9569327 (-)
trip10a trip10,trip10a,LOC107596831,LOC107670505,LOC107672474 coding downstream 111836 9538376 ~ 9563382 (-)
rhbdf1a rhbdf1a,LOC107587928,LOC107711277,LOC107596807,LOC107672493,LOC107754036,LOC107670513 coding upstream 19113 9698064 ~ 9740157 (-)
nprl3 LOC107711278,LOC107596811,LOC107754028,LOC107670498,LOC107672508 coding upstream 82379 9761330 ~ 9774275 (-)
hbba2 zgc:92880,LOC107754031,LOC107711188,LOC107587925,LOC107596824,LOC107672461 coding upstream 97723 9776674 ~ 9777433 (-)
hbba1 ba2,ba1 coding upstream 104680 9783631 ~ 9784425 (-)
hbae1.1 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding upstream 112591 9791542 ~ 9792514 (-)
G18608 NA non-coding downstream 28652 9646313 ~ 9646566 (-)
G18602 NA non-coding downstream 83927 9589921 ~ 9591291 (-)
G18599 NA non-coding downstream 103413 9571600 ~ 9571805 (-)
LOC122342127 NA non-coding downstream 141431 9512446 ~ 9533787 (-)
G18439 olfm2,olfm2a non-coding downstream 189863 9481321 ~ 9485355 (-)
G18623 NA non-coding upstream 74284 9753235 ~ 9753522 (-)
G18628 hbaa1,si:ch211-5k11.8,LOC107682494,LOC107587926 non-coding upstream 106298 9785249 ~ 9786124 (-)
G18634 LOC107596828,LOC107588005,LOC107596825,LOC107703325,LOC107587921,LOC108440249,LOC108440213 non-coding upstream 110665 9789616 ~ 9793185 (-)
G18638 LOC107703356,LOC107674672,LOC107754020,LOC107596819 non-coding upstream 222580 9901531 ~ 9908617 (-)
G18717 NA non-coding upstream 722882 10401833 ~ 10402211 (-)
G18433 LOC107670519,LOC107563315 other downstream 212313 9426572 ~ 9462905 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other downstream 537129 9134043 ~ 9138089 (-)
zgc:113210 NA other downstream 667775 8992714 ~ 9007443 (-)
fmc1 NA other downstream 1276390 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 1456163 8218902 ~ 8219055 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 314882 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 715363 10394314 ~ 10396341 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other upstream 1332985 11011936 ~ 11064598 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other upstream 1733034 11411985 ~ 11429179 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other upstream 2015321 11694272 ~ 11714719 (-)

Expression


Co-expression Network