G18870


Basic Information

Item Value
gene id G18870
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10211229 ~ 10211446 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21186
GTTACACAAACCATTCTCCCCCTATAAAAATAATGAACTGATACTTATGTGACATCATTAATAGGAAGTGACATCATAGAAGTCTTCTAAACAACATTGTGAACAGGCACCTTCTTTAATAATTATAACTAAATTATGTTGTGAAATTGTGTTTGTCAAGCTTAACGACTCAACCCCGTTACATCAATTAAAGATAGAAAACTATTACTTGTGAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21186 True 218 lncRNA 0.48 1 10211229 10211446

Neighbor

gene id symbol gene type direction distance location
CI01000001_10150798_10152858 MIPA coding upstream 58291 10150373 ~ 10152938 (+)
CI01000001_10141190_10146911 PTGES3, PTGES3A coding upstream 63171 10141190 ~ 10148058 (+)
CI01000001_10093069_10104108 RND1B, RND1, RND1A coding upstream 105530 10092902 ~ 10105699 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding upstream 130050 10072627 ~ 10081179 (+)
CI01000001_09946111_09958162 NA coding upstream 252983 9944120 ~ 9958246 (+)
CI01000001_10321783_10325266 NA coding downstream 110201 10321647 ~ 10325305 (+)
CI01000001_10328133_10329110 NA coding downstream 116594 10328040 ~ 10329110 (+)
CI01000001_10395420_10396473 NA coding downstream 183405 10394851 ~ 10396705 (+)
CI01000001_10420931_10426716 NA coding downstream 208872 10420318 ~ 10427147 (+)
CI01000001_10525795_10530510 WNT1 coding downstream 311816 10523262 ~ 10530543 (+)
G18864 NA non-coding upstream 1412 10202501 ~ 10209817 (+)
G18813 NA non-coding upstream 30393 10170951 ~ 10180836 (+)
G18815 NA non-coding upstream 46235 10159147 ~ 10164994 (+)
G18851 NA non-coding upstream 78476 10132550 ~ 10132753 (+)
G18850 NA non-coding upstream 78885 10132128 ~ 10132344 (+)
G18873 NA non-coding downstream 12433 10223879 ~ 10260714 (+)
G18890 NA non-coding downstream 13480 10224926 ~ 10225528 (+)
G18902 NA non-coding downstream 40662 10252108 ~ 10252654 (+)
G18874 NA non-coding downstream 73317 10284763 ~ 10335916 (+)
G18884 NA non-coding downstream 93485 10304931 ~ 10320075 (+)
CI01000001_09435836_09436037 NA other upstream 773166 9435836 ~ 9436373 (+)
G17354 NA other upstream 970552 9234463 ~ 9240677 (+)
G17353 NA other upstream 982370 9216022 ~ 9228859 (+)
G17234 NA other upstream 2178746 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 2670643 7531541 ~ 7540586 (+)
G18896 NA other downstream 28454 10239900 ~ 10241492 (+)
G18872 NA other downstream 59700 10271146 ~ 10281369 (+)
G18937 NA other downstream 263538 10474984 ~ 10476389 (+)

Expression


Co-expression Network