gngt2a


Basic Information

Item Value
gene id gngt2a
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 22384731 ~ 22387485 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235854.1
TAAAAATGACCATTATGCgtgaacattatttttcatccttttAGAAAAAACGATCATTTAAAAGTGTGACTAtgacagatttaaaatgaatgtctaACTTTCTTTTTGCTCAGGGCAAGATGGCGCGGGATATGTCCGATAAGGACATCCTTAAAATGGAGTTGGAACAACTTCAGAAGGAGGTGAAGACCGCCAGAGAGCCTGTTTCTAAAACGGCAAAGGAGATTTGTGAATGGGTAGAGGCCCAATCTGCAGAAGATCCTCTCATAAAAGGAGTTCCTGAGGACAAAAACCCCTTTAAGGAGAAGGGTGGATGCATAATAACTTAGCACACGTCATTTCTTGTGGCAAAATTAGGTATTACTTTGAGCAAATAAGAGCTGTTCCACTATACATCATAGAACAAATACTTTACCTTACAAAAAGTAATGGTTTAGGCTGCGTGTATCTATTCTTACACTAAGGACTAAGAAAGGGAGCCCTTTTGAAACAAAcgttttg
>XM_043235855.1
TTCATCAGTATTCAGTTATTCATTTTACTTCATAAATGTTATGTACATCATATGCGTTCTGATCTTAGTAAATTGAATTTAGCATATATAAGAATTATATGTGCATGGTCAGTATTGTAGGCTCCTAGAGTCGCTGAAAGCCCAACTTATTTGTTCTTCTGGAAGTGTTCTGGGTCAGTGACATGTTGACctcaaaatgtcttaaatgcaTCAACTGCACAAAGAGATTCAGAGAGATTTGACCTCATTAATTACCAAGATGGCTTAAGCTGATCAGAAATCTGGATGAAGGAAGTGTGCTTGTTGGGGATCAGTCTCCACCCCCCTCACCTCTTACCATCTGGAGGCGATCCTGAAGAGGCGACGGCTCCAGACCAAAGCATTCAGTTCATCACCGGACCCCAAACCCTGTACATGGTCCCTTAAAGTGCAGAGAGCGTCCCGTTCCCTCCATTGGCTGCCCCACTGACCGATAGGGCAAGATGGCGCGGGATATGTCCGATAAGGACATCCTTAAAATGGAGTTGGAACAACTTCAGAAGGAGGTGAAGACCGCCAGAGAGCCTGTTTCTAAAACGGCAAAGGAGATTTGTGAATGGGTAGAGGCCCAATCTGCAGAAGATCCTCTCATAAAAGGAGTTCCTGAGGACAAAAACCCCTTTAAGGAGAAGGGTGGATGCATAATAACTTAGCACACGTCATTTCTTGTGGCAAAATTAGGTATTACTTTGAGCAAATAAGAGCTGTTCCACTATACATCATAGAACAAATACTTTACCTTACAAAAAGTAATGGTTTAGGCTGCGTGTATCTATTCTTACACTAAGGACTAAGAAAGGGAGCCCTTTTGAAACAAAcgttttg

Function

NR:

description
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG:

id description
K04549 GNGT2; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235854.1 False 501 mRNA 0.38 2 22386843 22387485
XM_043235855.1 True 864 mRNA 0.43 3 22384731 22387485

Neighbor

gene id symbol gene type direction distance location
LOC122341813 NA coding upstream 1944 22374082 ~ 22382787 (+)
LOC122333458 NA coding upstream 13059 22365276 ~ 22371672 (+)
LOC122332454 LOC107667744,LOC107582924 coding upstream 22329 22356954 ~ 22362402 (+)
nags LOC107585096,LOC107662425,LOC107740635,LOC102299446 coding upstream 28212 22349117 ~ 22356519 (+)
si:ch211-237i5.4 si:ch211-237i5.4,LOC107662436,LOC107711287,LOC107585097,LOC107667762,LOC107582952,LOC107740660 coding upstream 36964 22344662 ~ 22347767 (+)
col1a1a LOC107585052,LOC107740634,LOC107582926 coding downstream 46888 22434373 ~ 22449649 (+)
ppp1r9ba ppp1r9b,ppp1r9ba,LOC107740632,LOC107717206,LOC107667750,LOC107582927 coding downstream 67917 22455402 ~ 22490790 (+)
nr1d1 LOC107585045,LOC107740628,LOC107662394,LOC107582883,LOC107667757 coding downstream 181482 22568967 ~ 22575990 (+)
hoxb13a hoxb13a,LOC107687788,LOC107662424,LOC107585093,LOC107717198,LOC107740673,LOC107582955 coding downstream 285991 22673476 ~ 22675120 (+)
hoxb10a hoxb10a,LOC107662435,LOC107740623,LOC107585092 coding downstream 297528 22685013 ~ 22689691 (+)
LOC122341843 NA non-coding upstream 294800 22035882 ~ 22089931 (+)
G22201 NA non-coding upstream 650309 21734138 ~ 21734422 (+)
G22198 NA non-coding upstream 748161 21636123 ~ 21636570 (+)
G22197 NA non-coding upstream 748652 21635744 ~ 21636079 (+)
G22084 LOC107684649,LOC107590786,LOC107725047,LOC107582907,LOC107678868,LOC107710878 non-coding upstream 1001607 21381808 ~ 21383124 (+)
G22340 atp5g1,LOC107740625,LOC107662391,LOC107582887,LOC107585044 non-coding downstream 123943 22511428 ~ 22672911 (+)
G22554 ddx5,LOC107695114 non-coding downstream 552762 22940247 ~ 23028505 (+)
G22581 LOC107740652,LOC107662412,LOC107582935,LOC107687786,LOC107710056,LOC107578312,LOC107577241 non-coding downstream 701988 23089473 ~ 23095422 (+)
G22582 LOC107687786,LOC107710056,LOC107662412,LOC107740652,LOC107585075,LOC107582935,LOC105912825,LOC103364773 non-coding downstream 713459 23100944 ~ 23148618 (+)
G22584 NA non-coding downstream 726793 23114278 ~ 23116840 (+)
hdac5 hdac5,LOC107667756,LOC107582878,LOC107585055 other upstream 48504 22268986 ~ 22336227 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other upstream 358820 21976509 ~ 22025911 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other upstream 408066 21975252 ~ 21976665 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other upstream 650604 21637743 ~ 21734127 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other upstream 970445 21295702 ~ 21414286 (+)
G22344 rapgefl1,LOC107585050,LOC107662398,LOC107740631,LOC107717207,LOC107667751 other downstream 141504 22528989 ~ 22530060 (+)
G22329 LOC107585049,LOC107740630,LOC107662396,LOC107582928,LOC107717208 other downstream 158673 22546158 ~ 22547208 (+)
hoxb5a hoxb5a,LOC107717200,LOC107662384,LOC107687777,LOC108413114,LOC107740619 other downstream 334537 22722022 ~ 22726158 (+)
hoxb2a hoxb2,hoxb2a,LOC107585087,LOC107662381,LOC107582889,LOC107687781 other downstream 378162 22765647 ~ 22770602 (+)
LOC122341356 il2rb,LOC107695139,LOC107583317 other downstream 511848 22899333 ~ 22908135 (+)

Expression


Co-expression Network