LOC122342101


Basic Information

Item Value
gene id LOC122342101
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13349978 ~ 13352450 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235892.1
aagtgttCACTCAGTTGAGGTTTGCTGACTGAGATCTCAGTGATGTCAGAAGTTGTGGGCTGGAcctcatatatatgtgtgtatatatatatacacgcttGTGCAGTGGAGTAAgaagttgttttgtttcctgTCTTAGACTACACTGAAGGCAATAACAATGACTTCTCTGCAGAGCATCATCTTGTTGGTTGTTCTTTGTCTCAGCGACCTTGTTGCAAGTGCAGATGAGATCAAATATCAAGGTGACAATATCACTATTAAGTGTCCTGCGCCTCCGGAAGGAGCTCTGGGTGTAAATCTCTACAGCAGACGGGAGATCAGCCGCAGAGTCATGTACttctttttgaaaaacaagaaattaaCTATCCATCTAGACTTTGAAAAACGTGTTGAAGTGAAATATGACAAGACCCTGACAATAAACATCATGAACCTGAAGTCCACAGACACTGGGGCTTTCTGGTGCACATGCAACAATCTGTTTGATTCATGTACAATGGGTGACTCgggtgtttttcttttagtgcGCGATCCACCGATCAGTCTCGCCTCTTCAACAAGCGCTAGCTCAAAGTCGGGTGGCATGAATGACTTGCTGATCCCAGTGACGGCTCTCACAGTTGGCAGCGTGTTCTTACTGTTACTCCTTGTGGTTGGATTGTGGCTGGTACCCAAGgtgAGGAAACTAATCAGAAACAAAGAACAGGAAGtagaagaagaggagaaaagGTGTAACAATGGAGTGTACGAGGTCATGACTGTTCCGCGAAGGATGTAGTGTATATGAGACTTATCATTATtctaactgtgtgtgtgtgtgtgtatgaacaaaaatatgtttttgtactgttttgcaTGTTGCTCATTCAATTCTTTCACACCTACTTTAGTTCAgtctgactgaggttgatttTCCGAcctatttttattgaaatttggCACCAagtaaatctttttaaatgtctgacTTTGTTTCAGTAGAAATTTCAgctctcttctgtttttttctaaatagaGTTATAGagttgtgtatttatatttaaattcttgAGCATTAATCATAATTGTTTTGACTGTGGATACTGTGCTTTTGATTCTCTGTACTGTGTTGGAATTTGTGTATTACATCTTTTGATGGAagaatttttgtattataaatgtaaaggTTACCTTTAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235892.1 True 1182 mRNA 0.39 4 13349978 13352450

Neighbor

gene id symbol gene type direction distance location
sept9a sept9a,LOC107689620,LOC107601241,LOC107724438,LOC107688081 coding downstream 1272 13285376 ~ 13348706 (-)
tnrc6c1 LOC107724432,LOC107590414,LOC107601217,LOC107698663 coding downstream 122840 13173351 ~ 13227138 (-)
yipf2 yipf2,LOC107698640,LOC107601236,LOC107689625,LOC107724423 coding downstream 215340 13130936 ~ 13134638 (-)
LOC122341259 clpp,LOC107753176,LOC107590418,LOC107689627,LOC107724426,LOC107698620,LOC107601229 coding downstream 238599 13107831 ~ 13111379 (-)
LOC122341774 NA coding downstream 249334 13097129 ~ 13100644 (-)
LOC122342102 nmrk1,LOC107724440,LOC107601244,LOC107682648 coding upstream 1543 13353993 ~ 13358941 (-)
zgc:163143 LOC107724428,LOC107689697,LOC107601243,LOC107688084,LOC107590412 coding upstream 6489 13358939 ~ 13364611 (-)
thraa thraa,LOC107601247,LOC107709996,LOC107689619,LOC107688087,LOC107753060 coding upstream 46506 13398956 ~ 13411948 (-)
nsfa nsfa,LOC107601245,LOC107709994,LOC107689618,LOC107590408,LOC107688085 coding upstream 83483 13435933 ~ 13453487 (-)
psmd11a psmd11a,LOC107709998,LOC107688086,LOC107601249,LOC108442534,LOC101476208 coding upstream 101816 13454266 ~ 13460815 (-)
G19726 NA non-coding downstream 220370 13125521 ~ 13129608 (-)
G19703 ighv6-1 non-coding downstream 258826 13090671 ~ 13091152 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding downstream 269357 13080070 ~ 13080621 (-)
LOC122332187 NA non-coding downstream 277150 13072560 ~ 13072828 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding downstream 447068 12900781 ~ 12902910 (-)
G19811 NA non-coding upstream 5129 13357579 ~ 13357789 (-)
G19872 NA non-coding upstream 281109 13633559 ~ 13633785 (-)
G19947 NA non-coding upstream 545181 13897631 ~ 13898932 (-)
LOC122342150 NA non-coding upstream 565250 13917700 ~ 13930277 (-)
G20029 zgc:86896,LOC107654493,LOC107721506,LOC107590453,LOC107719989,LOC107601274 non-coding upstream 707131 14059581 ~ 14060492 (-)
G19676 LOC107690708 other downstream 281788 13005996 ~ 13068190 (-)
G19700 NA other downstream 302484 13047041 ~ 13047494 (-)
cacna1aa LOC107690704,LOC107571502 other downstream 586888 12681990 ~ 12763090 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other downstream 670178 12622783 ~ 12679800 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 1006106 12339187 ~ 12343872 (-)
gng13b NA other upstream 433559 13786009 ~ 13792602 (-)
G19933 NA other upstream 452918 13805368 ~ 13805978 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other upstream 850480 14202930 ~ 14204350 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other upstream 1082697 14435147 ~ 14439541 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 1768356 15120806 ~ 15179359 (-)

Expression


Co-expression Network