G18896


Basic Information

Item Value
gene id G18896
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10239900 ~ 10241492 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21219
GAGAAATCGAAGCGGGAGAAGAACATAGCCCAGCGTGCTTGTCGGGGATTCAGTCTTTTCGCAGCTCTCAGGTATTCCAAGTTCTTATGGTCAGTGAGGACCAGGAAGGGGTGTTTGGCTCCCTCCAACCAATGCCTCCATTCTTCCAGAGCCAACTTGACCGCCAGGAGCTCGCGGTCACCGATGTTGTAGTTGACCTCCGCCGGGTTGAGCTTGCGGGAGAAGAAGGCGCATGGGTGGAGCCTACTTGGTGTCCCCTGCTGCTGAGAGCGGACCGCTCCCACTCCTGTGGTGGAGGCGTCCACCTCTACTACGAAGGGCAGGTCAGGATTGGGGTGGACGAGGAGGGGAGCGGTGGTGAAGGCTTCCTTGAGGGCCTCGAAGGCGTTGGTGGCAGTTGGAGTCCAGGACAGAGACTTGGGCTGGTTCCGGAGCAGGTTGGTGAGTGGATGAACGATGGAGCTGTAGTTCTTGATGAAACGACGGTAGAAGTTTGCGAAGCCAAGGAAGCGTTGGAGTTCTTTTATGGTAGATGGAGTGGGCCAGGACTTGATAGCTTCCACCTTCCCCTCGCGTATCCGGATGAGGTTATACGCGCTGCGGAGGTCCAGCTTGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21219 True 619 TUCP 0.45 3 10239900 10241492

Neighbor

gene id symbol gene type direction distance location
CI01000001_10150798_10152858 MIPA coding upstream 86962 10150373 ~ 10152938 (+)
CI01000001_10141190_10146911 PTGES3, PTGES3A coding upstream 91842 10141190 ~ 10148058 (+)
CI01000001_10093069_10104108 RND1B, RND1, RND1A coding upstream 134201 10092902 ~ 10105699 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding upstream 158721 10072627 ~ 10081179 (+)
CI01000001_09946111_09958162 NA coding upstream 281654 9944120 ~ 9958246 (+)
CI01000001_10321783_10325266 NA coding downstream 80155 10321647 ~ 10325305 (+)
CI01000001_10328133_10329110 NA coding downstream 86548 10328040 ~ 10329110 (+)
CI01000001_10395420_10396473 NA coding downstream 153359 10394851 ~ 10396705 (+)
CI01000001_10420931_10426716 NA coding downstream 178826 10420318 ~ 10427147 (+)
CI01000001_10525795_10530510 WNT1 coding downstream 281770 10523262 ~ 10530543 (+)
G18890 NA non-coding upstream 14372 10224926 ~ 10225528 (+)
G18870 NA non-coding upstream 28454 10211229 ~ 10211446 (+)
G18864 NA non-coding upstream 30083 10202501 ~ 10209817 (+)
G18813 NA non-coding upstream 59064 10170951 ~ 10180836 (+)
G18815 NA non-coding upstream 74906 10159147 ~ 10164994 (+)
G18902 NA non-coding downstream 10616 10252108 ~ 10252654 (+)
G18874 NA non-coding downstream 43271 10284763 ~ 10335916 (+)
G18884 NA non-coding downstream 63439 10304931 ~ 10320075 (+)
G18880 NA non-coding downstream 95395 10336887 ~ 10338149 (+)
G18878 NA non-coding downstream 98545 10340037 ~ 10344121 (+)
CI01000001_09435836_09436037 NA other upstream 801837 9435836 ~ 9436373 (+)
G17354 NA other upstream 999223 9234463 ~ 9240677 (+)
G17353 NA other upstream 1011041 9216022 ~ 9228859 (+)
G17234 NA other upstream 2207417 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 2699314 7531541 ~ 7540586 (+)
G18873 NA other downstream 15620 10223879 ~ 10260714 (+)
G18872 NA other downstream 29654 10271146 ~ 10281369 (+)
G18937 NA other downstream 233492 10474984 ~ 10476389 (+)
CI01000001_10538498_10539667 RPS26 other downstream 296980 10538388 ~ 10539846 (+)

Expression


Co-expression Network