si:ch211-106h11.3 (LOC107691099,LOC107708266,LOC107755605,LOC107563746,LOC107672933,LOC107574113)


Basic Information

Item Value
gene id si:ch211-106h11.3
gene name LOC107691099,LOC107708266,LOC107755605,LOC107563746,LOC107672933,LOC107574113
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2131218 ~ 2140821 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235918.1
GAAAACAAGCGTTAGAAACTCCAGTGCCCGAATCATTCACACGATCACACCGGAATAAACGCGCCTTTCTGGATTATTAACGCTGAGATCCTGCACTGCTCATTTTCTGTGGACACTGAGGGGTGTATGAGGAAGATGAGGGATTTAATGTGTGTGGTGGTGTTTGTGTTGATCGTCTGCACGACGGTGCGAGCGAGGTGTCCGAAGCCGTGTGCGTGTCCCGCGGAGCGAGCCGTGTGCCCGCCGGGCGTCAGCGCCGTGCCCGACGCCTGCGGCTGCTGTAAGGTGTGTGCCGCCCAGCTGAACGACGACTGCCATGAAGACAAGCCCTGTGACCATCACAAGGGCCTGGAGTGTAACTACGGCAACGACGTGGCCAGTATCCACGGAATCTGCCGAGCCAAACTGGAAGGCCGCTCTTGTGAATACAACGGCCGCATGTATCAGAATGGAGAAAACTTCCGCGCGGGCTGCAAACACCAGTGCACCTGCATCGACGGGGCGGTGGGCTGCGTGCCCCTGTGCCCCACTGATATCCCTCTGGCGTCGGCCTCCTGTCCCGCACCCCGACTGGTCAAAATCCCCGGCCAGTGCTGCCTCAGCGTGGACTGTCACAGCGAGTCCTCCGTCCTCCCGCCGGTGTTCAGACGGCCGCAGCCGCCTCCGTATCTGTTCCCCGACCTCCACGCCTACAAGAAACCCCGACCGAAGCCGTACCCCCGCAAGCCCAAAGACGCCCTGAGCAACGAGCTCATAGAGCTGGAGAAAAAGTGGGAGAAACCACGCAGCCGAAAGCATTTGCCAGCATGGAAGCAAGCCGGACGGCAATGTGTTGCACAGACGACAAGCTGGACGCCTTGTTCGCGCAGCTGCGGGATGGGCGTTTCATCTCGGGTCACCAATGAGAACGCGCAGTGCAAGCTGCTGAAGGAAACCAGACTCTGCAGCGTCCGTCCCTGTAGTTCTGTGGCTGTGCCTATAAAGAAGGGGAGGAAATGCTCTCGCACCCAAAAGTCTCCAGAGCCTCTTCGCCTGCGCTACGCTGGCTGCCGCAGCACCCGCCTCTACCGACCAAACTACTGTGGGACGTGCCTGGACGGGCGATGCTGCTCGCCCCGCCGCACTCGGACGGCCCCCGTGCTCTTCGCCTGCCCCGATGGAGAGCACTTCGAGAGGGCCGTCATGTTCGTGCAGTCCTGTAAATGCAACGACGAATGTGGCCACCTGAACGATGCGGCGCTCCCGCCCCAACGCTGGCTGTACGGCGACATGCACAAGTTTCTTGATTAACGCCTCGTTTGTCCAAAGACCCGCCCCCACATCTTTCCCCATTCAATAGAGTAGCGTTTCGAAGTGTAACTCTGAGTAGACGCCAGGCCGAGGCCTTATTATAACGCAAATCCATGTGGAAAAAAGGGCAATTTTGGGTTTCCAATCCCTTGTGCCGAGAGCCTTAGTATAGATGTGCTTACCGCCAGGATCCAGGATGGGATGAATCCCAGTTGTGAATATATACAATGGATTTTCTGATTGACTGCTCCTTACCACGAACAGTAATGCATTCTGAGGCACCTGTATCTCAATAAGACTTAAACAGGTTTGAAGGAAAAACTTGCCTCAGCGGGACGCTGGTTAGATGCCTAAATGTGGTGGAACTGACTCTCAGCTTCACAAGCTGGTCTTTACTTCTTCTTTAGCGAATGCTTTGCCTCGATGTTCAAAGAACAGCCGGCAAACACGAAGGAAACTCAATGGGAAGTCGTTTTAAGCTACCCAAGGTTTGACTCAGCTGCTTGTGGACTCGATGCTGAGATTGATGGTTTCGTGAGCCCATGACTCCATCAACTCACCGAGGGATATTTGCCAAGTGCCGCCGCTCCCTGGCGTCAAAATGTCGGCTCCTCTGCTCCCGGCTAATTACAATCCTCTTCTTTGGGGGCAGAAAGAAACCCAGTAACCCTTTggtttgcaataaaaatatgtttaaaacacCAGCATCTGATGTAAACATGTAATTTGAAAGTAATGGGTGGGATGGTTCCTTCAAACGCTGGTCTGTAATCTACCACGTGATGGCAGAGCCTCGTGCAAATGGCActggtgtctgtgtgttttataatgcTGCAGTCTCTATTTCTGCCTGGCATTGGTGCATGAACCAACGGAGGTGACGTCGCACCATCTGCCCTGAAGAATGAGAGTTTGAACAGGCtttgagacaaaaaaaactacattttgaagGAAGAAAGCATGCGGTCACTAAATAAttgtgctactttttttttttatttaagctccaTCTCAAATGAGTAAAATggcatacattttacatttcaaatgccatgtttataaaagcatttttttttatgtcgtGGAAAGGCTGAATAAACTGTCAATTACATGCTGCATGTAAACTTAATGGAAATAAACCcctttctgttgttttgtgt

Function

NR:

description
PREDICTED: protein CYR61-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235918.1 True 2450 mRNA 0.52 5 2131218 2140821

Neighbor

gene id symbol gene type direction distance location
rangap1a rangap1,rangap1a,LOC107745514,LOC107722837 coding upstream 120787 2002679 ~ 2010431 (+)
LOC122333258 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding upstream 189425 1925747 ~ 1941793 (+)
LOC122330213 plbd1,LOC107563730,LOC107572281,LOC107672894 coding upstream 260608 1867624 ~ 1870610 (+)
LOC122332958 NA coding upstream 401221 1728370 ~ 1729997 (+)
LOC122329718 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding upstream 403525 1711295 ~ 1727693 (+)
LOC122341668 LOC107755616,LOC107672923 coding downstream 120789 2261610 ~ 2267508 (+)
LOC122341669 LOC107745245,LOC107575245,LOC107755608,LOC107672924 coding downstream 126767 2267588 ~ 2270464 (+)
LOC122333376 NA coding downstream 152482 2293303 ~ 2296045 (+)
LOC122341568 LOC107672927,LOC107755614,LOC107742419,LOC107712223 coding downstream 182879 2323700 ~ 2340093 (+)
LOC122341598 NA coding downstream 200710 2341531 ~ 2349689 (+)
G16238 myh9b,myh9,LOC106957010,LOC107751969 non-coding upstream 52368 2075160 ~ 2078850 (+)
G16219 myh9,LOC107745511,LOC107672897,LOC107691111 non-coding upstream 61503 2063565 ~ 2069715 (+)
G16226 NA non-coding upstream 75218 2050185 ~ 2056000 (+)
G16243 LOC107755616,LOC107672923 non-coding upstream 84834 2043651 ~ 2046384 (+)
G16233 NA non-coding upstream 100375 2028394 ~ 2030843 (+)
G16241 NA non-coding downstream 1406 2142227 ~ 2143806 (+)
G16218 ddx39ab,LOC107563749,LOC107755611,LOC107672936,LOC107708265,LOC107691101,LOC107563747 non-coding downstream 3048 2143869 ~ 2150485 (+)
G16246 NA non-coding downstream 51265 2192086 ~ 2243135 (+)
G16240 NA non-coding downstream 101465 2242286 ~ 2302128 (+)
G16239 NA non-coding downstream 102536 2243357 ~ 2244932 (+)
G16223 txn2,LOC107745512 other upstream 16879 2112037 ~ 2114339 (+)
trnar-ccu_2 NA other upstream 265433 1865713 ~ 1865785 (+)
G16002 pick1,LOC107734822,LOC107734770 other upstream 265989 1619312 ~ 1865229 (+)
trnar-ccu_1 NA other upstream 480490 1650656 ~ 1650728 (+)
G16003 pick1,LOC107734822,LOC106607154 other upstream 481724 1559387 ~ 1649494 (+)
LOC122333054 LOC107708263,LOC107691115,LOC107755610,LOC107563748,LOC107672908 other downstream 19525 2160346 ~ 2165693 (+)
G16347 NA other downstream 427263 2568084 ~ 2568999 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other downstream 500325 2641146 ~ 2646756 (+)
G16530 LOC107601546 other downstream 1142169 3282990 ~ 3283656 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other downstream 1179999 3320820 ~ 3323054 (+)

Expression


Co-expression Network