ccdc103 (LOC107758482,LOC107583073,LOC107695153)


Basic Information

Item Value
gene id ccdc103
gene name LOC107758482,LOC107583073,LOC107695153
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12510609 ~ 12512465 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235934.1
ATTGCTTTACTCGAACCATAGAACAAAATATAGAAGTTACggaaattaagaaataaaatttgGTTTTTATATACAATCATGTACAGAGAGAAAAGGTCTTGGCACATTTGAGTAAATACACTGCAAATAAAGTAGTGCAAACAGCTTGTCAGTGTAAACCTGTTGTATAACAGGGTTctgaaattataaaacaaatgttttatagaCTTATTGTAAGTACATGtggtaaatacatttgttttgaatattgACATTTGTATATGGTAAACTAAACTTctgtaatgtattaattttaagtATTACTCTTTTAATTACAGCTAGTTAGAACGGTTAGATAAGCTTTTGTTACAGttgtgaaattaatatttaatttaaagactCCCCTGGTTTAAAAACCTTGTGTATGCATTTAagaaattgaaaacatttgtttaaagtgTAAGTTATActcttgttttaataattttatatagtaTGTTCTGCTATACGGCTATATATGCATGCTATGTTTTAAATTTCGCTGATCTGAAAATAAAGCTTTCTTGCTCCAAAGCATGAATACGTACCGTGGTTGCTATGGAGACCAGTTTGTTATGACGGTCTGAGCTCGCAAGTTAAGCTTAGCTAGCTATGCTGATACTCATTTGCTGAATTTCTGTCTTGAGGTAAATAACATTATCAGTTCTCCGCATAAAAGTGAATTGGGTGACTTTATACGTAACGGTAAGAGCAGATATGGAGAAATCTGATATGATAAATTTCAGTTCTCTTGAAAAAGAGCTTAAAGCGGCGCTGGAAGCGGACCGGAAGTATCAAAGGGAAAATGATGCCAAATTTCGCGCTTTAAATCAAAATGTCGCCAGCTATGAAGAATTCAGGGACATAGTACTTGCATCTCACTTAAAGCCCCTTGACAGAAAGGATATCTCTGGCGCACCTCGAAAGCAGCCATGGAACCCAGTTGCTTTTGGTACAAAGTGTGAAAGTGCTTCATCTGAGGAGGTCCAGCCAGAGTTATCTGAGATCCAACCAAGAAGTGCATCAGAATTCATCCGTGACTGGCGCAGACTTGCAGGAAGCTCACTGGAAAAGTACAGTCTCCTCGTAAGTCTTGGTGGCAAGGCTCTGCAGGAAATCTTCAGAACTGAGGTTGGCCTTGGTCTTCTCGGCGAGTTCCTTCTGATTCTGTCACAGTGTCTTAGGTCAGGCGATGAGGATATAGTGATCGGAGTGCTAGACGGCCTTTCCAGAACTGGTCGCTTTGGCCTTAACCTGTCTCTTCTTAGTCAGGCTGAACAAAAAGCCTGTGAGGAGCTTTTCCACAAGCTACAAACTGAAGCAGGTGATTCCTCTAACACTTCAGTGGTTTGTGAAGCCAGTCTTGCAGCGCTAATGGAAAAAtatggcatttaa

Function

NR:

description
PREDICTED: coiled-coil domain-containing protein 103-like

GO:

id name namespace
GO:0003341 cilium movement biological_process
GO:0003146 heart jogging biological_process
GO:0070286 axonemal dynein complex assembly biological_process
GO:0030030 cell projection organization biological_process
GO:0001947 heart looping biological_process
GO:0005930 axoneme cellular_component

KEGG:

id description
K23731 CCDC103; coiled-coil domain-containing protein 103

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235934.1 True 1413 mRNA 0.38 3 12510609 12512465

Neighbor

gene id symbol gene type direction distance location
LOC122342135 LOC107695140,LOC107758481,LOC107583074 coding downstream 102 12509191 ~ 12510507 (-)
abi3a LOC107758490,LOC107583075,LOC107695026 coding downstream 1817 12498774 ~ 12508792 (-)
si:dkey-283b1.6 NA coding downstream 12598 12493718 ~ 12498011 (-)
rarab rara,rarab,LOC108434941,LOC108276117,LOC108261354,LOC107737746,LOC107695008,LOC107554136,LOC107582978,LOC107689638 coding downstream 62885 12345435 ~ 12447724 (-)
LOC122342092 LOC107758479 coding downstream 177768 12322244 ~ 12332841 (-)
rpl23 rpl23,RPL23,rl23 coding upstream 138 12512603 ~ 12514795 (-)
si:dkey-283b1.7 si:dkey-283b1.7,LOC107758487,LOC107695187,LOC107689703,LOC107554098,LOC107737768 coding upstream 2685 12515150 ~ 12521787 (-)
sgsm3 sgsm3,LOC107737740,LOC107695086,LOC107758493,LOC107689630 coding upstream 17644 12530109 ~ 12544481 (-)
LOC122329559 LOC107582973,LOC107723206,LOC107554143,LOC107695115,LOC107689629,LOC107737739,LOC796777,LOC108436680 coding upstream 58563 12571028 ~ 12661848 (-)
LOC122332086 gtf2f1,LOC107737737 coding upstream 462243 12974708 ~ 12980093 (-)
LOC122332655 NA non-coding downstream 215186 12294140 ~ 12295423 (-)
LOC122341243 LOC107729463,LOC107658509,LOC107582987 non-coding downstream 239673 12265845 ~ 12270936 (-)
G19518 LOC107729456,LOC107658501,LOC107582995,LOC107554123,LOC107689649,LOC107737759 non-coding downstream 280230 12226575 ~ 12230379 (-)
G19503 NA non-coding downstream 328125 12182258 ~ 12182484 (-)
G19463 NA non-coding downstream 413247 12092899 ~ 12097362 (-)
G19677 LOC107737766 non-coding upstream 351845 12864310 ~ 12886954 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding upstream 388316 12900781 ~ 12902910 (-)
LOC122332187 NA non-coding upstream 560095 13072560 ~ 13072828 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding upstream 567605 13080070 ~ 13080621 (-)
G19703 ighv6-1 non-coding upstream 578206 13090671 ~ 13091152 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 166737 12339187 ~ 12343872 (-)
LOC122341756 NA other downstream 589842 11909775 ~ 11920767 (-)
G19383 NA other downstream 629650 11853748 ~ 11880959 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other downstream 782608 11712820 ~ 11728001 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other downstream 795890 11694272 ~ 11714719 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other upstream 110318 12622783 ~ 12679800 (-)
cacna1aa LOC107690704,LOC107571502 other upstream 169525 12681990 ~ 12763090 (-)
G19676 LOC107690708 other upstream 493531 13005996 ~ 13068190 (-)
G19700 NA other upstream 534576 13047041 ~ 13047494 (-)
gng13b NA other upstream 1273544 13786009 ~ 13792602 (-)

Expression


Co-expression Network