si:ch211-207b24.4


Basic Information

Item Value
gene id si:ch211-207b24.4
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7148922 ~ 7157297 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235962.1
AAAAAGGAACATTTCCTGAAAAATAGTACTATATATATGGCTAAAAACCCCGAGAATGTTGTACTTTCAGTGAAGACTTTAACAGGCAACACATAAACTGCAGACATGGCTTCAGCTCCCATGGAAGTGGCAGCCTTAGGAAGACCTCTGTTTCCTGGTATGCTTTATGACTGCCGCAAGGATTCCTTCATTCCAGGTGTTACTCTGTGGGATAAGAATTCACTAAGTGAAGATCTGGACTCCCGTCCCCAGCTCCAGACAGATTTGAAGCTCAGTAGCTCTGACTCGCTCTCTAGTAAGTCCAGTCTTATGGATATAAGCGCTTCTTTGAAGACCAGCTTCTTGGGGGGGCTGGTGGAGGTGGGAGGATCTGCCAAGTATCTGCATGACACCAAATCCTCAAACCAGCAGTCTAGAGTGACAATGTATTACAGTGAAACATCCAGATTTGAGCAGCTCACTATGACCCAGCTGGACAAGGTCACCTACCCTCAAGTGTTTGACCAGCAAACTGCAACTCATGTGGTTACAGCTGTACTTTACGGAGCTCGGGCCTTCATGGTGTTTGATCggacattttcagaaaatgagaACAAGGAGAATATTGAAGGAGAACTGAATGTAATGGTCAAGAAGATCGCTGCATTTTCAATTGAAGGAAAGGGAGCTGTACAAATGACAGCTAACGAAAAGGAGGTCGCTGAAAATATCAGTTGCACATTTCATGGTGACTTCCATCTCAAACAAAATCCCACCACATACATGGAGGCCCTGGATTTGTACAAGAAGCTCCCCACTCTTATGAAGGACAGTGCAGTTCCAGTAAAGGTCTGGCTTTATCCTCTTCACCTACTGGATAATAAAGCAGCTCAGCTAGAAAGAGAAATCAGCTCAGGTCTGGTTTCCAACACTCAAGATATAATAGAGGGGCTGGAGGAGGCAGAGAGGACATATAATGATCTGTCCAGAAATACACTTGTGAATGTTTTTCGTGACATTAAAGAGAGACTCAACTCATTTCAGgaatcatttaacatttacaggTCGGTGCTCCGGAAAGAATTGTCCATGGTCTTGCCTGTTATTCGAGGAGGAGGAATGGAGGAGAAGTCACTGGCTGAAATGTTAAAGATTCACTATGACTCCCCTTTTGTTGCTAGCAAGATTAACCAGTGGTTAGATGATGTGAAGTCTGAACTTCACCTCTTGAGCTCATACATCAAGATGCTGGAGGGGATCAAAATTCAAGATTCAGACAGTCTCAAGGCCATCCTCCTTAATCCTGATGTTGATTCTGTGGTGTGCTTGACTTTCACATCTCTGAAGTTTGAAGACCCGTATCTTGAATGCCTGACAGAGTTTCTGAAAATAGAAAGGTTTAAGAATTTAGATGAGGAAACAAACATGGTTCCAGTGCCTGCTGTCAAAAAGTGGTTCAGTGATCTTGATGTCATAATAAATATGAGAAATAACTTACTCCAGTTCAGAAGTTTTTCAGAGGCCAATAAAGATCAAAAAAGGATCTGCTTCATCATTTCTGCCATCTCTGATCCCTCAAAAAAAGGCTCCTCCATCTATCTGTATGAAAAAGGGAAgctgacaaacacacagttCCAGCCCAATTCCAAACCAATCCAGCCAATAATAAAGATACTCCCAGATGAAACTGTGTCCATCAAAATGCAGAAACCTCCAAATGGGGGAACAGTGCAGTACAGAGTGGAGTACAAGCAGatagaaaattattttggagCTGACCAACAGTGGCATGTCATTAACACTGATAATGAGGAGCTTATTCTGACTGGATTGAAATCTGGAAAAATGTACTGGATCCGCTACAGGATAGTGAGTACAGTAGGAGTGAGTGAAAACAGTGAGACCGTCTCCTTTTCACCAAGTTCGGtgCGTCCTCAGCTTGTGGGTGGGACAGGAGGTTCTGAATTCTCCTTTGTAACTTCCGCCATCAGCACCTTCAAAAAGATCACAGTTACTTATGGCCAGGATGGAAATACTTACCCCATGAAGTCAATCCAAATACTTTTCAGCAATGGTCATGTAATGGTCACTGGTAAGAGTATAGGGGATCACAAAAAGGAACTTCTTTTTGATGACAATGATAAAATAATCGCTGCAACACTGTGGtcagataaaaatataaacagactCAGTGGAATGGAATTTGTAGTTGTCAATGCTGGTGTCAGAAAAACCTTGTCTGTCATGTGTACGAATCAGGGTTACCCAGTGAGGCTTGATGTGAAGTCTGGAAAGTGTTACGGCATTATAGCAAAACATGGATCTGACATTGATTCTTTGGGTTTCTTCTTCATTTAGATGCCAGTGACTTAAAAGTATCACATCAATGAGTCTAAACCGTGATTTTTAGGTTTTCCGTGActatgtattttgcattttgttctgttttatttattgttttcacaAGTCTTTGTTACCTCTCGGTTTTGTGCAAAATACCTTTATGTCCATTGACAATATAAAGCTTAACttgatttttcttttggtgAAGATTCTATATCATCATatgatctttttatttaattggtaagctgttgttcttttttgatgtttaaagtaacaataattattatataaatcaaaaCAGTTGTATTTTCTTGTCATTAGCTTttccttttaatgttttagacAGCCcttaaacaaaatattcatatcAGGAATTccatattatgcattttaaatgtaatattataattaaagttacttaatataaaaaattttccCTGCTTTCACCTTCCTCAACCACACCCAAAGCGCGACAactacaaaacaataaaaaacgaGACAAGAGAAGGCTCTGTGACCcatagtttttaatttgaagCAAGGCTGATGGAGAAGAAGAGAATCAGCAGAGTGGGGAGGACGAGAAGGCAAATAAGGATTAACTAAATCACAGACATAAAGAGAAAATTCATGCACAGCTTTATAAGTTAAAACAAGTGCTTTAAACCCAATGCGCGACTGAACTGGAAGCCAGTGCAAGTTACACAGGACACCACTAATGTGCTGCCTTGAGGGACTGTGAGTGAGAACACGTGCTTCTGAGTTCTGACTATACTGTAGCTATACTGTAGACCAACACATAGAGAATCTTCAATTCTTACAGTGATAAAAGCATGGATCAGCCTTTCAGTAGCACAGAATGGAAAGTCCTAATCCTAGCAATATTACTGAAAcgataaaatgctgatttagtaACACTCCTAATATGTGCCTCCAGTGTCAAATTAACATCAAATATAACGCCAAGGTTACAAGCTTGTGAAGATGGCAGTACACAGCTTCAGTGTCAAATTAAAGCTGCTACATTCATGAATGGCTGCTGGCGTACCAATAAGTAAAACCTCAGTCTTAGAgctatttagttttaaaaagttgtgAAACGTCCATACTCTTATGTCCTGCAAACATTTAGAAAAGATTTCAGAACTAACTGTAACATGAGATTTGTACTGATGTATATTTGTGTCTTCAACATAAAAATGATACCCAAGA

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235962.1 True 3537 mRNA 0.40 5 7148922 7157297

Neighbor

gene id symbol gene type direction distance location
ppap2d ppap2d,LOC107661820,LOC107711217,LOC107602726,LOC107744960,LOC107670514,LOC107599313 coding upstream 260117 6862409 ~ 6888805 (+)
tnfsf14 LOC107744984,LOC107661863,LOC107711150,LOC107602699 coding upstream 302281 6841019 ~ 6846641 (+)
dnm2a dnm2a,LOC107661823,LOC107602725 coding upstream 315698 6796786 ~ 6833224 (+)
trim35-12 LOC107670464,LOC107602713,LOC107599344,LOC107728678,LOC107711176,LOC107661834 coding upstream 464724 6679181 ~ 6684198 (+)
gipc1 gipc1,LOC107670535,LOC107728688,LOC107599306,LOC107661840,LOC107602717,LOC107711205 coding upstream 470205 6670199 ~ 6678717 (+)
LOC122329403 fn3krp,LOC107670452,LOC104918611,LOC107599346,LOC107744985 coding downstream 3457 7160754 ~ 7164555 (+)
tbcd tbcd coding downstream 9237 7166534 ~ 7197688 (+)
metrnla metrnl,LOC107672492,LOC107711221,LOC107587969,LOC107744963,LOC107670526,LOC107599318 coding downstream 84400 7241697 ~ 7251923 (+)
slc16a5b LOC107672512,LOC107711222,LOC107587967,LOC107599319,LOC107744965 coding downstream 113653 7270950 ~ 7281036 (+)
LOC122341489 LOC107587965,LOC107672450,LOC107711223,LOC107744987,LOC107670478,LOC107599348 coding downstream 137660 7294957 ~ 7300733 (+)
G17704 NA non-coding upstream 172657 6922196 ~ 6976265 (+)
G17699 NA non-coding upstream 245761 6902746 ~ 6903161 (+)
G17683 NA non-coding upstream 301316 6846938 ~ 6847606 (+)
G17663 NA non-coding upstream 443517 6705195 ~ 6705405 (+)
G17662 NA non-coding upstream 444220 6704414 ~ 6704702 (+)
G17791 NA non-coding downstream 37485 7194782 ~ 7266722 (+)
G17806 NA non-coding downstream 108046 7265343 ~ 7282946 (+)
G17808 LOC107587964,LOC107599321 non-coding downstream 152877 7310174 ~ 7314152 (+)
G17861 NA non-coding downstream 235294 7392591 ~ 7392872 (+)
G17862 NA non-coding downstream 240942 7398239 ~ 7398465 (+)
G17590 NA other upstream 592172 6504915 ~ 6556750 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 953884 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 1045296 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 1186034 5957403 ~ 5962888 (+)
G17302 NA other upstream 1550690 5597099 ~ 5598232 (+)
LOC122331592 LOC107744988 other downstream 426057 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 498734 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 650946 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 681659 7838956 ~ 7841669 (+)
LOC122331768 LOC107710248 other downstream 792464 7949761 ~ 7950417 (+)

Expression


Co-expression Network