narfl (narfl,LOC107583598)


Basic Information

Item Value
gene id narfl
gene name narfl,LOC107583598
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 25423943 ~ 25430065 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236008.1
GCAGCTAAAACAATGGCGTCGCATTTCAGTGGAGTGCTTCAGCTCACGGATCTGGATGACTTTATTACTCCGTCTCAGGTTGAACAGATGTTTCTGCATGCAACGTTTGAAGCTGACACATTATTATCAGAATGTGTGAAGCCCGTGAAGGTGGAAAAGAAGCAGGGCAGGTCTGTGGCTAAAATCCAGATAGAAGATGATGGCAGTTATTTTCAGGTCGATCATGACGGTCAAAGGCAAAAGTTGGAGAAAGCGAAGATCACTCTGAACGACTGTCTGGCTTGCAGTGGCTGCATCACGTCTGCGGAGAGTGTCCTGATCACACAGCAGAGTCACGAGGAGCTGTATCGCGTGCTGCATCGAAATAAGCAGGTCGGCAGCAGCGAGCAGAAGCTGGTGGTGGTGTCCGTGTCTCCTCAGTCCAGAGCCTCCCTGGCTGCGCACTACGGCCTCGGCAGCAGCGAGGTGGCTCGCAGACTCGCCAGCTTCCTGAAGAACTTGGGTGTCCATCACGTGTTCGACACCGGCTTCAGCCGCTCATTCAGCCTGATAGAGAGCCAGAGGGAGTTTGTAGAGCGGTTCCGACGGAGGGAAGCGGACAAGAAGGCTCTACCGATGCTGGCGTCTGCCTGTCCGGGCTGGATTTGCTATGCTGAGAAGACTCATGGTGATTTCATCCTCCCGTACATCAGCACCACCCGCTCACCGCAGCAGATGATGGGCTCTCTAGTCAAGGGCTATTTTGCCTCTCAGAAGGGTGTTTCGCCGCAGAACATTTACCATGTGACCGTCATGCCCTGCTATGATAAGAAACTCGAGGCTTCTAGACCAGACTTCTACCTCAGTGAGCACGAGACCAGAGAAGTGGACTGCGTCATCACTTCAGGTGAAGTTCTGAAGATGTTGGAGGAGGAGAATGTGTCTTTGAGGGACCTGGAAGAAGTGGCGCCTTTAGACACGATgtTCAGTAATGTATGTGGGGAGGAGCTGCTGGGTCACGCAGGGAGCGGATCAGGAGGATACCTTCATCACGTCTACAAACATGCCGCCAAACAGCTGTTTGGGGTTGAAGTAGATGAACTCGCTTACAAGACAATGAAAAACAAAGACTTCCAGGAAGTCACTCTAGAGAAGGACGGTCAAGTTCTGCTTCGATTCGCTGCCGTCTACGGCTTCAGGAACATTCAGAACCTGGTGCAGAAGCTGAAACGCGGAAAGTCACCTTACCACTTTGTAGAAGTCATGGCATGCCCGTCAGGATGTCTGAATGGCGGCGGTCAGCTGAAGCCGTCGTCGGATCAAACTAACAGAGAGCTACTGCAGCAAGTGGAGGAGCTGTACCGCGGCGAACGTACCTCAGAGCCAGAGCTGGACTCCCGAGTGGCCGAGCTCTACCGGGGCTGGCTGGAGAGCGTGGGAGAGGAGCGGGGCCGACAGCTGCTGCACACGCAGTACCACGCCATAGAGAAGAACACCAACGGCCTCAGCATCAAGTGGTGAGGAGCCACCAGACTCTCAACTCTTTGTTTCTTTGCCTTCCTTCAAATGTTTGTCCAAGCTAAGTTAAACTTTAACCAGCTGAGTTAAACTTTAAGATGCGTTTGACACTAAACCAACTATGAACAAAAGTGATTGTGTTTGAAAAGACAGGCGAAGTCATATTTCCTGCAAATATGCTTCTATAAAGTAAAGTAAGATTACTAATAATTCCTCTCTttactgtttagtttttttttttcaatccatGAATGTTGCCCTGTGTTATTTTTCCTTTCATGTATT
>XM_043236009.1
ATTGGATAGTTTAGAAGTCATTCACAGATCCCTGCCAACCACTTCACGGGAACACGGGCAGCAGCTAAAACAATGGCGTCGCATTTCAGTGGAGTGCTTCAGCTCACGGATCTGGATGACTTTATTACTCCGTCTCAGGAATGTGTGAAGCCCGTGAAGGTGGAAAAGAAGCAGGGCAGGTCTGTGGCTAAAATCCAGATAGAAGATGATGGCAGTTATTTTCAGGTCGATCATGACGGTCAAAGGCAAAAGTTGGAGAAAGCGAAGATCACTCTGAACGACTGTCTGGCTTGCAGTGGCTGCATCACGTCTGCGGAGAGTGTCCTGATCACACAGCAGAGTCACGAGGAGCTGTATCGCGTGCTGCATCGAAATAAGCAGGTCGGCAGCAGCGAGCAGAAGCTGGTGGTGGTGTCCGTGTCTCCTCAGTCCAGAGCCTCCCTGGCTGCGCACTACGGCCTCGGCAGCAGCGAGGTGGCTCGCAGACTCGCCAGCTTCCTGAAGAACTTGGGTGTCCATCACGTGTTCGACACCGGCTTCAGCCGCTCATTCAGCCTGATAGAGAGCCAGAGGGAGTTTGTAGAGCGGTTCCGACGGAGGGAAGCGGACAAGAAGGCTCTACCGATGCTGGCGTCTGCCTGTCCGGGCTGGATTTGCTATGCTGAGAAGACTCATGGTGATTTCATCCTCCCGTACATCAGCACCACCCGCTCACCGCAGCAGATGATGGGCTCTCTAGTCAAGGGCTATTTTGCCTCTCAGAAGGGTGTTTCGCCGCAGAACATTTACCATGTGACCGTCATGCCCTGCTATGATAAGAAACTCGAGGCTTCTAGACCAGACTTCTACCTCAGTGAGCACGAGACCAGAGAAGTGGACTGCGTCATCACTTCAGGTGAAGTTCTGAAGATGTTGGAGGAGGAGAATGTGTCTTTGAGGGACCTGGAAGAAGTGGCGCCTTTAGACACGATgtTCAGTAATGTATGTGGGGAGGAGCTGCTGGGTCACGCAGGGAGCGGATCAGGAGGATACCTTCATCACGTCTACAAACATGCCGCCAAACAGCTGTTTGGGGTTGAAGTAGATGAACTCGCTTACAAGACAATGAAAAACAAAGACTTCCAGGAAGTCACTCTAGAGAAGGACGGTCAAGTTCTGCTTCGATTCGCTGCCGTCTACGGCTTCAGGAACATTCAGAACCTGGTGCAGAAGCTGAAACGCGGAAAGTCACCTTACCACTTTGTAGAAGTCATGGCATGCCCGTCAGGATGTCTGAATGGCGGCGGTCAGCTGAAGCCGTCGTCGGATCAAACTAACAGAGAGCTACTGCAGCAAGTGGAGGAGCTGTACCGCGGCGAACGTACCTCAGAGCCAGAGCTGGACTCCCGAGTGGCCGAGCTCTACCGGGGCTGGCTGGAGAGCGTGGGAGAGGAGCGGGGCCGACAGCTGCTGCACACGCAGTACCACGCCATAGAGAAGAACACCAACGGCCTCAGCATCAAGTGGTGAGGAGCCACCAGACTCTCAACTCTTTGTTTCTTTGCCTTCCTTCAAATGTTTGTCCAAGCTAAGTTAAACTTTAACCAGCTGAGTTAAACTTTAAGATGCGTTTGACACTAAACCAACTATGAACAAAAGTGATTGTGTTTGAAAAGACAGGCGAAGTCATATTTCCTGCAAATATGCTTCTATAAAGTAAAGTAAGATTACTAATAATTCCTCTCTttactgtttagtttttttttttcaatccatGAATGTTGCCCTGTGTTATTTTTCCTTTCATGTATT

Function

symbol description
narfl Predicted to enable 4 iron, 4 sulfur cluster binding activity. Acts upstream of or within sprouting angiogenesis. Predicted to be part of CIA complex. Is expressed in several structures, including eye; gill; heart; liver; and pleuroperitoneal region. Orthologous to human CIAO3 (cytosolic iron-sulfur assembly component 3).

NR:

description
cytosolic Fe-S cluster assembly factor NARFL isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236008.1 False 1782 mRNA 0.51 11 25424003 25430065
XM_043236009.1 True 1791 mRNA 0.51 11 25423943 25430065

Neighbor

gene id symbol gene type direction distance location
cbx8a LOC107758117,LOC107578989,LOC107728583,LOC107689994,LOC107559248,LOC107670683 coding upstream 84052 25336185 ~ 25339891 (+)
cbx4 cbx4,LOC107758118,LOC107559247,LOC107690020,LOC107670662,LOC107728779,LOC107562304 coding upstream 90078 25327720 ~ 25333865 (+)
tbc1d16 tbc1d16,LOC107559246,LOC107689993,LOC107670685,LOC107562324 coding upstream 115509 25287754 ~ 25308434 (+)
gaa gaa,LOC107559225 coding upstream 137018 25277792 ~ 25286925 (+)
grin2ca grin2c,LOC107658706,LOC107758122,LOC107559244,LOC100329743,LOC107728554 coding upstream 261082 25106181 ~ 25162861 (+)
fahd1 fahd1,LOC107586194,LOC107555652,LOC107586183,LOC107690023 coding downstream 6098 25436163 ~ 25437150 (+)
ndufb10 LOC107555654,LOC107583619,LOC107758101 coding downstream 12545 25442610 ~ 25444546 (+)
kdelr2a kdelr2a,kdelr2,LOC107670681,LOC107728665,LOC107555655,LOC108432184,LOC102784720,LOC102215457 coding downstream 20330 25450395 ~ 25454405 (+)
spag9a spag9a,LOC107690005,LOC107583630,LOC107670658,LOC107728806 coding downstream 25095 25455160 ~ 25484444 (+)
LOC122336725 LOC107555667,LOC107755177,LOC107583709,LOC107690013,LOC107751312,LOC107670672 coding downstream 156458 25586523 ~ 25604509 (+)
G23096 NA non-coding upstream 2813 25420272 ~ 25421130 (+)
G23095 NA non-coding upstream 4168 25418670 ~ 25419775 (+)
G23078 grid2ipa,LOC107559228,LOC107758114,LOC107689997,LOC107728614,LOC107670677,LOC107583579 non-coding upstream 29689 25392518 ~ 25394254 (+)
G23077 NA non-coding upstream 41030 25379228 ~ 25382913 (+)
G23031 NA non-coding upstream 156786 24957311 ~ 25267157 (+)
G23069 NA non-coding downstream 409 25430474 ~ 25434548 (+)
G23106 NA non-coding downstream 84149 25514214 ~ 25519748 (+)
G23125 NA non-coding downstream 201074 25631139 ~ 25767050 (+)
G23127 NA non-coding downstream 204559 25634624 ~ 25727704 (+)
G23126 NA non-coding downstream 217121 25647186 ~ 25725255 (+)
arhgap17b arhgap17b,LOC107559249,LOC107758115,LOC107670674,LOC107689995,LOC107728593 other upstream 49445 25346784 ~ 25374498 (+)
LOC122342019 LOC107758123 other upstream 430725 24983281 ~ 24993218 (+)
G23026 LOC107559242,LOC107758098,LOC107658707,LOC107728516,LOC107695967,LOC107568243 other upstream 612366 24721526 ~ 24811577 (+)
mcm5 mcm5,LOC107703892,LOC107670920,LOC107719335 other upstream 893174 24525280 ~ 24530769 (+)
G22953 mfsd6l,LOC107719337,LOC107583315,LOC107563357,LOC107728393,LOC107703882 other upstream 974654 24446878 ~ 24449289 (+)
tob1a tob1a,LOC107690006,LOC107758110,LOC107555665,LOC107583660,LOC107728672,LOC107670673 other downstream 94244 25524309 ~ 25569403 (+)
LOC122331665 rsad1,LOC107690008,LOC107755174 other downstream 143692 25573757 ~ 25577043 (+)
LOC122336634 NA other downstream 183094 25613159 ~ 25615905 (+)
G23121 rsad1,LOC107755174,LOC107690008,LOC107670671 other downstream 230983 25661048 ~ 25662317 (+)
LOC122341783 arl16,LOC107583744 other downstream 402440 25832505 ~ 25834198 (+)

Expression


Co-expression Network