LOC122330723


Basic Information

Item Value
gene id LOC122330723
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1279263 ~ 1281171 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006248071.1
ACATAGTGTGCACCACGTTTATGGCAGGATTATCGCACCGAATTATTCACAATCATATCATTTACTGCTTTATGTTTTCCTTAGAAAACCATTGAAAGCTGGCATTTTCTTAATTTGAATAAGCCTACTGAAAACGGGAATTTCTGCAGCCCAGAAGCGAAAATATCCGGCACCGCCCTTCTTTTTCAGTCCTTCACTTGTTTTCATTATATGACACTGAACTGATTCCAGCGCAGTGAGAAAAAGCCTGTACTCAGGTCTGTACATCTGTACACAAGGCTCCATTATTTCACTTATCTCCAAGTACTTCAGGTTTTCTGTTAAGAAGCTCCAGTTCTGAATCATGCCGTGCACACAAAGGTTGGTGGCCAACACACAGGGAAtttctggtaaaaaaaataaggTGCCAAATAATCCACAGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006248071.1 True 425 lncRNA 0.40 3 1279263 1281171

Neighbor

gene id symbol gene type direction distance location
LOC122329817 LOC100537134 coding upstream 44359 1230001 ~ 1234904 (+)
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding upstream 54346 1217521 ~ 1224917 (+)
kcnj4 kcnj4,LOC107711802,LOC107679476,LOC107727044 coding upstream 81225 1188018 ~ 1198038 (+)
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding upstream 99922 1176232 ~ 1179341 (+)
LOC122329844 LOC107563756,LOC107731666 coding upstream 103192 1160237 ~ 1176071 (+)
LOC122332730 NA coding downstream 91361 1372532 ~ 1374290 (+)
LOC122329966 NA coding downstream 95278 1376449 ~ 1380026 (+)
LOC122330340 NA coding downstream 106313 1387484 ~ 1389699 (+)
LOC122330593 polr2f,LOC107727050 coding downstream 134446 1415617 ~ 1418312 (+)
LOC122330185 micall1,LOC107727039,LOC107674481,LOC107711806,LOC107563760 coding downstream 169067 1450238 ~ 1453084 (+)
G15929 NA non-coding upstream 38216 1240346 ~ 1241047 (+)
G15927 NA non-coding upstream 63658 1215316 ~ 1215605 (+)
G15925 NA non-coding upstream 65635 1213325 ~ 1213628 (+)
G15911 NA non-coding upstream 126035 1152825 ~ 1153228 (+)
G15887 NA non-coding upstream 147788 1129892 ~ 1131475 (+)
LOC122330682 NA non-coding downstream 102077 1383248 ~ 1384894 (+)
G15967 NA non-coding downstream 133044 1414215 ~ 1415199 (+)
G15972 NA non-coding downstream 160088 1441259 ~ 1441742 (+)
G15944 NA non-coding downstream 204400 1485571 ~ 1490779 (+)
G16004 NA non-coding downstream 333989 1615160 ~ 1615529 (+)
LOC122330066 NA other upstream 228112 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 269832 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 503729 754430 ~ 775534 (+)
LOC122330407 NA other upstream 643024 625364 ~ 636239 (+)
G15563 NA other upstream 722182 553698 ~ 557081 (+)
G15939 NA other downstream 9798 1290969 ~ 1291564 (+)
G15955 NA other downstream 109568 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 114676 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 278216 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 338141 1619312 ~ 1865229 (+)

Expression


Co-expression Network