LOC122332655


Basic Information

Item Value
gene id LOC122332655
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12294140 ~ 12295423 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006248508.1
CATGTATTGCAAGAATTCCAAGAAATCCCAGAAAGAGTCATGTCTTCTGGCTTGTGCTTGAAATTCCATAGGTTCCAAGACTTGCACAAACTCTACAACTGCTCTTTTAACTTTCTCAACACTACAATACAGGAATACAGACCACGATTACCAAATGTGTGCTGCATGTTCAGACGCGGACGCACGCAGAACACAGGCCTGGTTTCGCAGCTCAACAGATCAGCACATAAAGGAATCCAAACACAAGAGCATGACCTGTAGGCTGTAAATTATGAGAACTGACATTACAGCCTTCCCCCACATACAgagatacatacatatacagccATTCTGTCGAGATGTCAGCAGTCAATGAATTCCAGATGGTGCATTTGGAGAGCAGCAGCCATGCCAGTTATATATCCATGTTATCTTTGTAGTATGTTTATACATACTTTGCCTTCCTCCTGTGAGATACTATATATGTGATATACTGTAGGGGAGAAACCAATGGCTAGTCACACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006248508.1 True 506 lncRNA 0.42 3 12294140 12295423

Neighbor

gene id symbol gene type direction distance location
g6pc1b g6pcb,LOC107582985,LOC107729528,LOC107658515,LOC107554093 coding downstream 3156 12288422 ~ 12290984 (-)
kat7a LOC107689642,LOC107554133,LOC107737751,LOC107729527,LOC107582986,LOC107658517,LOC108437993 coding downstream 6264 12279708 ~ 12287876 (-)
zgc:113090 LOC107729437,LOC107658438,LOC107577287,LOC107737781 coding downstream 14711 12276835 ~ 12279429 (-)
pheta2 zgc:153733,LOC107658512,LOC107729468,LOC107582989,LOC107554091,LOC107689645 coding downstream 38362 12251917 ~ 12255778 (-)
mylpfa mylpf,mylpfa,LOC107582990,LOC108249004,LOC108274226 coding downstream 44210 12246754 ~ 12249930 (-)
aoc2 aoc2,LOC107658518,LOC107729559,LOC107582984,LOC107689706 coding upstream 1631 12297054 ~ 12300573 (-)
LOC122336412 LOC107658520,LOC107554095,LOC107582983,LOC107729569,LOC107689640,LOC107737779 coding upstream 20027 12315450 ~ 12320066 (-)
LOC122342092 LOC107758479 coding upstream 26821 12322244 ~ 12332841 (-)
rarab rara,rarab,LOC108434941,LOC108276117,LOC108261354,LOC107737746,LOC107695008,LOC107554136,LOC107582978,LOC107689638 coding upstream 50012 12345435 ~ 12447724 (-)
si:dkey-283b1.6 NA coding upstream 198295 12493718 ~ 12498011 (-)
LOC122341243 LOC107729463,LOC107658509,LOC107582987 non-coding downstream 23204 12265845 ~ 12270936 (-)
G19518 LOC107729456,LOC107658501,LOC107582995,LOC107554123,LOC107689649,LOC107737759 non-coding downstream 63761 12226575 ~ 12230379 (-)
G19503 NA non-coding downstream 111656 12182258 ~ 12182484 (-)
G19463 NA non-coding downstream 196778 12092899 ~ 12097362 (-)
G19453 LOC107583009,LOC107729419,LOC107658421,LOC107730751,LOC107554101,LOC107689664 non-coding downstream 207919 12085329 ~ 12086221 (-)
G19677 LOC107737766 non-coding upstream 568887 12864310 ~ 12886954 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding upstream 605358 12900781 ~ 12902910 (-)
LOC122332187 NA non-coding upstream 777137 13072560 ~ 13072828 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding upstream 784647 13080070 ~ 13080621 (-)
G19703 ighv6-1 non-coding upstream 795248 13090671 ~ 13091152 (-)
LOC122341756 NA other downstream 373373 11909775 ~ 11920767 (-)
G19383 NA other downstream 413181 11853748 ~ 11880959 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other downstream 566139 11712820 ~ 11728001 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other downstream 579421 11694272 ~ 11714719 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other downstream 864961 11411985 ~ 11429179 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other upstream 43764 12339187 ~ 12343872 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other upstream 327360 12622783 ~ 12679800 (-)
cacna1aa LOC107690704,LOC107571502 other upstream 386567 12681990 ~ 12763090 (-)
G19676 LOC107690708 other upstream 710573 13005996 ~ 13068190 (-)
G19700 NA other upstream 751618 13047041 ~ 13047494 (-)

Expression


Co-expression Network