LOC122333427


Basic Information

Item Value
gene id LOC122333427
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8421202 ~ 8421632 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006248630.1
TTTCCAGAGAGGCTGTGGACCCTGCTTCATCACACGATCTCAGCCTTGAGGAGGAGCTGACCAGAAATGGATTCAGCAGATCTGCAGAGCTTTCAGGTGAACCCCAACGATCGATCGGATGGATAGTCAGGAGGAACAGGCGCAGATGGGAAACCCACCTATTTGGTAAAACATGGACTCGAGGCGCAGGGGAAGCAGATTCCAGTACTTGGTGGACAGGGAAGGTTACGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006248630.1 True 231 lncRNA 0.53 3 8421202 8421632

Neighbor

gene id symbol gene type direction distance location
LOC122329328 hebp1,LOC107670539,LOC107661078 coding downstream 32512 8385064 ~ 8388690 (-)
LOC122341283 hebp1,LOC107670539,LOC107661078 coding downstream 115209 8302071 ~ 8305993 (-)
LOC122331822 NA coding downstream 163989 8234899 ~ 8257213 (-)
LOC122334091 NA coding downstream 243207 8174036 ~ 8177995 (-)
irgf4 NA coding downstream 300173 8109057 ~ 8121029 (-)
LOC122331080 emp1,LOC107573034,LOC107698066,LOC107732522,LOC107678994 coding upstream 77100 8498732 ~ 8502673 (-)
zgc:65811 LOC107656948,LOC107698068,LOC107751600,LOC107575948,LOC107569882,LOC107732520,LOC107732523 coding upstream 91781 8513413 ~ 8524779 (-)
LOC122341497 NA coding upstream 109194 8530826 ~ 8535042 (-)
pde6hb LOC107724721 coding upstream 113479 8535111 ~ 8537581 (-)
LOC122330990 LOC107656950 coding upstream 290846 8712478 ~ 8714195 (-)
G18183 NA non-coding downstream 16630 8401630 ~ 8404572 (-)
G18155 NA non-coding downstream 31571 8306724 ~ 8389631 (-)
G18129 fam234b,LOC107714892,LOC107721680,LOC107576065 non-coding downstream 37591 8300414 ~ 8383611 (-)
LOC122331391 NA non-coding downstream 104113 8314102 ~ 8317089 (-)
G18128 NA non-coding downstream 213869 8206878 ~ 8207333 (-)
G18193 LOC107573033,LOC107758359,LOC107732521,LOC107569877 non-coding upstream 61015 8482647 ~ 8679157 (-)
G18196 NA non-coding upstream 74284 8495916 ~ 8497007 (-)
G18225 NA non-coding upstream 153679 8575311 ~ 8575731 (-)
G18228 NA non-coding upstream 195493 8617125 ~ 8617674 (-)
LOC122341612 NA non-coding upstream 345823 8767455 ~ 8773405 (-)
fmc1 NA other downstream 22374 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 202147 8218902 ~ 8219055 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other downstream 203114 8054039 ~ 8218088 (-)
zgc:113210 NA other upstream 571082 8992714 ~ 9007443 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other upstream 712411 9134043 ~ 9138089 (-)
G18433 LOC107670519,LOC107563315 other upstream 1004940 9426572 ~ 9462905 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 1572201 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 1972682 10394314 ~ 10396341 (-)

Expression


Co-expression Network