LOC122335662



Basic Information


Item Value
gene id LOC122335662
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 28393741 ~ 28394538 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XR_006248991.1
GTTTGGCTGAAGAAAGAGAGTAGGTTACCATATGAGGAGAGGGTTACTgaCTTTAACTTAAAACATGGCAGATTCTCACTCTGAGAGttatgaAGAGTTGATTACTCCACTGAAAGATGAACTGAGGAAAATTCTCAGGAACAGTAAGTCAGTAAAAGAAGGACCCACTAcgaaatttatattaaacacaacAGTTGTAACCGAAGACAAATTACTGAGAAA

Function


GO: NA

KEGG:

id description
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05332 Graft-versus-host disease
ko04940 Type I diabetes mellitus

RNA


RNA id representative length rna type GC content exon number start site end site
XR_006248991.1 True 222 lncRNA 0.37 3 28393741 28394538

Neighbor


gene id symbol gene type direction distance location
LOC122341391 LOC107758342 coding upstream 74032 28316600 ~ 28319709 (+)
LOC122334574 LOC107562041,LOC107676321,LOC107562032 coding upstream 321164 27574258 ~ 28072577 (+)
cacng5b cacng5b,cacng5,LOC107698772,LOC107556612,LOC107729207,LOC107664435,LOC108437158 coding downstream 258555 28653093 ~ 28658489 (+)
LOC122341396 NA coding downstream 317165 28711703 ~ 28714513 (+)
LOC122341397 LOC107556593 coding downstream 326009 28720547 ~ 28721944 (+)
LOC122335069 amn,LOC107556594,LOC107710691,LOC107698770,LOC107729201 coding downstream 341461 28735999 ~ 28737619 (+)
LOC122335596 rac1,RAC1,rac1a,LOC105898786,LOC108437155,LOC108412270,LOC107569188 coding downstream 390994 28785532 ~ 28789067 (+)
G23964 NA non-coding upstream 64330 28328465 ~ 28329411 (+)
LOC122335640 NA non-coding upstream 73585 28319710 ~ 28320156 (+)
G23953 NA non-coding upstream 158205 28227075 ~ 28235536 (+)
LOC122335654 NA non-coding upstream 357583 28034400 ~ 28036158 (+)
G23931 NA non-coding upstream 448525 27942182 ~ 27945216 (+)
G24132 NA non-coding downstream 309492 28704030 ~ 28705144 (+)
G24138 NA non-coding downstream 314242 28708780 ~ 28715865 (+)
G24139 NA non-coding downstream 315368 28709906 ~ 28716193 (+)
LOC122335688 NA non-coding downstream 323494 28718032 ~ 28719109 (+)
G24146 NA non-coding downstream 363157 28757695 ~ 28831744 (+)
LOC122335546 NA other upstream 1111335 27281827 ~ 27282406 (+)
G23695 NA other upstream 1546384 26846723 ~ 26847357 (+)
srsf2b srsf2b,srsf2,LOC104923358,LOC107755521,LOC108430244 other upstream 1592340 26798431 ~ 26801401 (+)
ubald2 ubald2,LOC107548684 other upstream 1620838 26759063 ~ 26772903 (+)
pitpnc1a pitpnc1,LOC107665814,LOC107691236,LOC107752702,LOC107743029,LOC108412868,LOC108274028,LOC107376579,LOC106903613 other upstream 1688010 26650829 ~ 26705731 (+)
G24115 si:ch73-374l24.1,LOC107729205,LOC107556610,LOC107698783 other downstream 121105 28515643 ~ 28560324 (+)
LOC122334878 si:ch73-374l24.1,LOC107556610,LOC107698783,LOC107664393,LOC108437159 other downstream 198266 28592804 ~ 28650650 (+)
LOC122341395 LOC107710694,LOC107556592,LOC107698764,LOC107729203 other downstream 312493 28707031 ~ 28708608 (+)
LOC122341400 NA other downstream 403776 28798314 ~ 28808828 (+)
LOC122335482 LOC107568598,LOC107698767,LOC107729206,LOC107664371,LOC107710703 other downstream 449276 28843814 ~ 28846375 (+)

Expression



Co-expression Network