G18951


Basic Information

Item Value
gene id G18951
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10431957 ~ 10433760 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21284
GCAAAAGCTCCACACAATCAGCATCAGCCACCATACAGGCACAGTGCAGGGGCTTCAGCGTGCCGTGCATTCTGTTCACATCTGCTCCCCTGCGTATAAGGTCTTCCACGTTATCATGTGGGAAGGAGCGAATGGCCGCTATGGTTCGAATGAGTCTTTCTGACAATGAGTATTTGCTCTGAATACTCTGCATGATGTACCACATAGTAGAGCTCATGTGGAACTAAAGGACATTTCACCCAGACCGGGTGACGCCACACCGAGATGAGATGGCTGTGAAAGTGGGAAAAATGATCCTAGGAAAATACAAAACAGAAAATCTATTAACAAGAGAATGATGTTGACAGAACAAGTAATATCTTTACATTAGGAATCATT
>TU21285
CTAAAGCTCTGGTAACACAACTCACCCTGCGTATAAGGTCTTCCACGTTATCATGTGGGAAGGAGCGAATGGCCGCTATGGTTCGAATGAGTCTTTCTGACAATGAGTATTTGCTCTGAATACTCTGCATGATGTACCACATAGTAGAGCTCATGTGGAACTAAAGGACATTTCACCCAGACCGGGTGACGCCACACCGAGATGAGATGGCTGTGAAAGTGGGAAAAATGATCCTGCACGAGTGAAAACAGCTGCAGGTCTGTAGCTAATCTGCCAGTGTGTCCGCGCAACACAAACACAGTGACGTCACGAGAGGAAGTGACAAACAACGCCATTTATTCGCCTGTTTTCATTGTCGAAACACGTTAGTAGTGTGGAAATGCGGCTAGAAATACGGGTAAAATTAGTTCACATACTGTACTGTTCGTGCCGAATATAGACTGGACGGGCCCTGATCTGAGGGCCCCTGAG

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21284 False 378 lncRNA 0.45 2 10431957 10432409
TU21285 True 471 lncRNA 0.41 3 10432095 10433760

Neighbor

gene id symbol gene type direction distance location
CI01000001_10420931_10426716 NA coding upstream 4810 10420318 ~ 10427147 (+)
CI01000001_10395420_10396473 NA coding upstream 35484 10394851 ~ 10396705 (+)
CI01000001_10328133_10329110 NA coding upstream 102847 10328040 ~ 10329110 (+)
CI01000001_10321783_10325266 NA coding upstream 106652 10321647 ~ 10325305 (+)
CI01000001_10150798_10152858 MIPA coding upstream 279019 10150373 ~ 10152938 (+)
CI01000001_10525795_10530510 WNT1 coding downstream 89502 10523262 ~ 10530543 (+)
CI01000001_10538498_10539667 RPS26 coding downstream 104628 10538388 ~ 10539846 (+)
CI01000001_10573770_10582123 LMBR1L coding downstream 140010 10573770 ~ 10582238 (+)
CI01000001_10582439_10582802 NA coding downstream 148618 10582378 ~ 10582821 (+)
CI01000001_10590766_10595793 DHH coding downstream 156676 10590436 ~ 10596238 (+)
G18882 NA non-coding upstream 28047 10402230 ~ 10403910 (+)
G18876 NA non-coding upstream 40359 10390688 ~ 10391598 (+)
G18878 NA non-coding upstream 87836 10340037 ~ 10344121 (+)
G18880 NA non-coding upstream 93808 10336887 ~ 10338149 (+)
G18874 NA non-coding upstream 96041 10284763 ~ 10335916 (+)
G18967 NA non-coding downstream 459 10434219 ~ 10434542 (+)
G18968 NA non-coding downstream 2010 10435770 ~ 10435995 (+)
G18969 NA non-coding downstream 2893 10436653 ~ 10436873 (+)
G18929 NA non-coding downstream 3566 10437326 ~ 10440371 (+)
G18933 NA non-coding downstream 51388 10485148 ~ 10487561 (+)
G18872 NA other upstream 150588 10271146 ~ 10281369 (+)
G18873 NA other upstream 171243 10223879 ~ 10260714 (+)
G18896 NA other upstream 190465 10239900 ~ 10241492 (+)
CI01000001_09435836_09436037 NA other upstream 993894 9435836 ~ 9436373 (+)
G18937 NA other downstream 41224 10474984 ~ 10476389 (+)
G19039 NA other downstream 417164 10850924 ~ 10853983 (+)
G19314 NA other downstream 1067434 11501194 ~ 11558673 (+)
G19395 NA other downstream 1247562 11681322 ~ 11681817 (+)

Expression


Co-expression Network