LOC122342129


Basic Information

Item Value
gene id LOC122342129
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 16596292 ~ 16597215 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250530.1
ACTTGCCCAGGCAGATGCAGCATCTTCGACACTTCAACTGTTTGAACGCTGCAGCGGATCTTTTCAGGGACTGATTAACACGATACCCAAGCACTTTTGTTACCTGAGGGTCTTCAAGCTTCATATTCAGAGTCATGATGAAAGCGAGGTGCAGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250530.1 True 157 lncRNA 0.48 3 16596292 16597215

Neighbor

gene id symbol gene type direction distance location
LOC122341966 NA coding upstream 121103 16473822 ~ 16475189 (+)
LOC122342073 NA coding upstream 133602 16461318 ~ 16462690 (+)
mrm2 mrm2,ftsj2,LOC107703397,LOC107674604 coding upstream 220801 16372769 ~ 16375491 (+)
snx8a snx8,LOC107758331,LOC107592787,LOC107674736,LOC107703396 coding upstream 226791 16359912 ~ 16369501 (+)
lfng lfng,LOC107703400,LOC107674646,LOC107758333 coding upstream 295068 16293222 ~ 16301224 (+)
tmem184a tmem184a,LOC107581701,LOC107572042,LOC107674661,LOC107745595 coding downstream 103206 16700421 ~ 16715677 (+)
ints1 ints1,LOC107572041,LOC107703394,LOC107674580 coding downstream 135147 16732362 ~ 16755909 (+)
si:dkey-43p13.5 LOC107753516,LOC107581781,LOC107745606,LOC107674624,LOC107576997 coding downstream 158838 16756053 ~ 16769443 (+)
zfand2a zfand2a,LOC107703388,LOC107568938,LOC107674713,LOC107745591 coding downstream 279639 16876854 ~ 16882081 (+)
galr2b galr2b,LOC107674614,LOC107564701,LOC107753547,LOC107703387,LOC108433115,LOC107745605 coding downstream 298754 16895969 ~ 16902970 (+)
G20656 NA non-coding upstream 288274 16307798 ~ 16308018 (+)
G20647 NA non-coding upstream 303486 16292605 ~ 16292806 (+)
LOC122333245 NA non-coding upstream 715623 15879468 ~ 15880669 (+)
G20469 NA non-coding upstream 716963 15879130 ~ 15879329 (+)
G20468 NA non-coding upstream 717866 15878189 ~ 15878426 (+)
G20744 NA non-coding downstream 189617 16786832 ~ 16787050 (+)
G20798 NA non-coding downstream 391997 16989212 ~ 17052645 (+)
LOC122341954 NA non-coding downstream 410180 17007395 ~ 17019304 (+)
G20797 snn,LOC107564698,LOC107703342 non-coding downstream 441976 17039191 ~ 17042404 (+)
G20801 NA non-coding downstream 460489 17057704 ~ 17062823 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other upstream 388446 16179620 ~ 16207846 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other upstream 852098 15706936 ~ 15744194 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other upstream 1316179 15269800 ~ 15280113 (+)
G20286 LOC107581737,LOC107654534 other upstream 1411419 15149112 ~ 15184873 (+)
LOC122331507 psmg3,LOC107703392 other downstream 93488 16690703 ~ 16699482 (+)
micall2a micall2,micall2a,LOC107703317,LOC107745593,LOC107568921,LOC107674716 other downstream 173330 16770545 ~ 16784811 (+)
nsmce1 nsmce1 other downstream 515833 17113048 ~ 17117041 (+)
LOC122341316 NA other downstream 540715 17137930 ~ 17200630 (+)
G20950 igfals,LOC107703367,LOC107719182,LOC107674637,LOC107565761,LOC107710645 other downstream 1121967 17719182 ~ 17723423 (+)

Expression


Co-expression Network