LOC122341774


Basic Information

Item Value
gene id LOC122341774
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13097129 ~ 13100644 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_285
TCAACATCACTATACATCATAAACTTGAGCCATTGCTCACAATGTGTTGTAACTGCAGCAAATCTCTTTACATTCAAGGAGAATACTAATGCAGCCGTGCCCAGAAACAGGCAGTTGCAGAAAGTGATGGTGAACACAGAGAGGCGTATTGATTCAGAAGAACTCACTCAGCCTGAGTCTCTGACTGTTCGTCCTGATGCCGCTCTCACTATCAACTGTAAAGTCTCCTATTCAGTTACAAGCTATGCTACAGCCTGGATTCGTCAACCTGCAGGAAAAGCTCTGGAGTGGATTGGATTGATCGACTATGATGGAGACTTATACTACAAGGATTCCCTGAAAAGCAAGTTCAGTATCAGCAGAGACACTTCCAGTAACACAATAACACTGAAAGGACAGAATATGAGAGCTGAAGACACAGCTGTGTATTATTGTGCCAGACACACAGTGACAGACGCTAACAAGATTCCTGTACAAAAACACCATCATCGCATTACAAATTATGTCTTTCAGATAATTGTACctaatcactaaaaataatttacaccaaaataaataaatcaataaaaaaattaccaaTCATCAATTTTTGCAGTACTTCACccttatttgctattttttatatgtgtgagatttatgatttattgttgATATTGTTGTTAAACAATAGTAGTCAGAAACACAATATTGCTTCAtaagcatcacaataataattGGATGCAAcgaaagtaaaaaacaaaat

Function

GO: NA

KEGG:

id description
K06856 IGH; immunoglobulin heavy chain

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_285 True 742 V_gene_segment 0.54 2 13097129 13100644

Neighbor

gene id symbol gene type direction distance location
LOC122341304 LOC107710248 coding downstream 4283 13092210 ~ 13092846 (-)
LOC122332140 ighm,ighv5-5,ighv5-4,ighv5-8 coding downstream 9862 13086375 ~ 13087267 (-)
LOC122341303 NA coding downstream 12163 13084026 ~ 13084966 (-)
LOC122332149 NA coding downstream 13395 13083209 ~ 13083734 (-)
LOC122332129 NA coding downstream 46268 13050286 ~ 13050861 (-)
LOC122341259 clpp,LOC107753176,LOC107590418,LOC107689627,LOC107724426,LOC107698620,LOC107601229 coding upstream 7187 13107831 ~ 13111379 (-)
yipf2 yipf2,LOC107698640,LOC107601236,LOC107689625,LOC107724423 coding upstream 30292 13130936 ~ 13134638 (-)
tnrc6c1 LOC107724432,LOC107590414,LOC107601217,LOC107698663 coding upstream 72707 13173351 ~ 13227138 (-)
sept9a sept9a,LOC107689620,LOC107601241,LOC107724438,LOC107688081 coding upstream 184732 13285376 ~ 13348706 (-)
LOC122342101 NA coding upstream 249334 13349978 ~ 13352450 (-)
G19703 ighv6-1 non-coding downstream 5977 13090671 ~ 13091152 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding downstream 16508 13080070 ~ 13080621 (-)
LOC122332187 NA non-coding downstream 24301 13072560 ~ 13072828 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding downstream 194219 12900781 ~ 12902910 (-)
G19677 LOC107737766 non-coding downstream 210175 12864310 ~ 12886954 (-)
G19726 NA non-coding upstream 24877 13125521 ~ 13129608 (-)
G19811 NA non-coding upstream 256935 13357579 ~ 13357789 (-)
G19872 NA non-coding upstream 532915 13633559 ~ 13633785 (-)
G19947 NA non-coding upstream 796987 13897631 ~ 13898932 (-)
LOC122342150 NA non-coding upstream 817056 13917700 ~ 13930277 (-)
G19676 LOC107690708 other downstream 28939 13005996 ~ 13068190 (-)
G19700 NA other downstream 49635 13047041 ~ 13047494 (-)
cacna1aa LOC107690704,LOC107571502 other downstream 334039 12681990 ~ 12763090 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other downstream 417329 12622783 ~ 12679800 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 753257 12339187 ~ 12343872 (-)
gng13b NA other upstream 685365 13786009 ~ 13792602 (-)
G19933 NA other upstream 704724 13805368 ~ 13805978 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other upstream 1102286 14202930 ~ 14204350 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other upstream 1334503 14435147 ~ 14439541 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 2020162 15120806 ~ 15179359 (-)

Expression


Co-expression Network