LOC122341888


Basic Information

Item Value
gene id LOC122341888
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 25704655 ~ 25706218 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_295
agtgtgtgtgaggtgggAGGGTCTTTCTCTCTACCGTCttaaagtctctctctctctggtctgaTCTCAGCATTATTCTTCAGCTCTGCTCATCTTCACACATCGACACCAAATCACAAGATGATCACAATCCTGTGTGCTTTCTTCACTCTTCTGAGCTGTGTCAGTGGAGTGACTGTAGTGACTCAGAGTCCATTAATCTCAGTCAATGAAGGACAAACAGCTCAACTGGACTGTAATCTGGGGACAGTAACTGATTATTCTGCTCAATGGTACAAACAGACTCCAGGAGGAGCTCCTCAATATGTGTTAGTGTTTTATCATGGCTGGGGCTCACCTTCATATGGATCTGGTTTCTCTGCTCCTAAATTCACATCAACACATTCATCTCAATCAGATTATCGTCTGATCATCAGTAATGTGGATGTGTCTGATTCTGCGGTGTATTACTGTCAGACATGGGACGACTCTGCTAAAGACAATGTATCACAGTGATTGACAGCAGGACAAAAACCTCCTCACTGATCACATTCACTTCTGCTTCTAGACATCAGATAtaaattttcttatatatatttatcaaaatctCCACACAATGACCATATAAAGTAGTAGTGATACTGTATATGTGCTATATTACAATTATAGCTATATGGTATGTTATGTATGTTGACTGTGGAGAGTCCTGCTGTAGTCAATCAAAGTCAATCTCTGAACTTGAACACATGATCTACTGATGACAGACACTAAAGGAAACCTTCCTTACAAACCTTTCTGTCTTCATAAGAATACGTTTATcagaatgtccaagctgctcttttatttttaaacaaagcataACATGATCAGTGATCTACAAACCGGACAAAAAAGCACCAGAAAAAGCCCAACTTTAATTTCAGAGTTTCCGTCATTGTCAGTCATCAACCATATAAGTGATTGTCAACTAACTAACTTTGCTTTTGTCTTCAAAACAGATTATTTTGCAAATGGAAAGCTCATctgcaaataaacaataataacgGATGAATGACATCATCTGGTCAAAAAGATGACAAACCAGCAGTTTATCTTGTAACTCCAAGCTTGCTGGAAAAACACGAAACCTGCTTGATTATGATGATATTTCTTACCCTCCTGACACTTAATCGGCGTACGAGCAGCACTGAAGGGAGTCTGAGTTCAGTGTCTTGTGTCTCTGAAACCTCGGGAGGTTTTTGTACGAGTGAAGATGTGAAATGCATCTCTGTGGTATTCGGCCAAGGAACAAAACTCAATGTGATCGGTAAGTTTTACTCTCGATTACTGTCCAGgcaccttatttatttttatttgttctacGTATTATTATTGGACAATAAATTgccatattttttcatattcacatatattctcaatttaattaaactgaatccttaaaataacattacgTGTAGAAATCCTTCTGACGTGTGCCTAGACGTTTTAAAAGGCTAATTATTTACtcag

Function

GO: NA

KEGG:

id description
ko04115 p53 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_295 True 1488 V_gene_segment 0.58 2 25704655 25706218

Neighbor

gene id symbol gene type direction distance location
LOC122336602 LOC107690031 coding upstream 5550 25696871 ~ 25699105 (+)
LOC122336676 rcvrna,LOC107690016,LOC107555668,LOC107755173,LOC107583783,LOC107725264 coding upstream 74022 25628899 ~ 25630633 (+)
LOC122336618 LOC107690031 coding upstream 92964 25609480 ~ 25611691 (+)
LOC122336725 LOC107555667,LOC107755177,LOC107583709,LOC107690013,LOC107751312,LOC107670672 coding upstream 100146 25586523 ~ 25604509 (+)
spag9a spag9a,LOC107690005,LOC107583630,LOC107670658,LOC107728806 coding upstream 220211 25455160 ~ 25484444 (+)
LOC122341380 NA coding downstream 433 25706651 ~ 25707147 (+)
LOC122341871 rcvrna,LOC107690016,LOC107555668,LOC107755173,LOC107583783,LOC107725264 coding downstream 14629 25720847 ~ 25722746 (+)
LOC122332877 NA coding downstream 130968 25837186 ~ 25840601 (+)
LOC122341789 NA coding downstream 138469 25844687 ~ 25845748 (+)
LOC122342152 NA coding downstream 143340 25849558 ~ 25850619 (+)
G23135 NA non-coding upstream 9787 25694486 ~ 25694868 (+)
G23106 NA non-coding upstream 184907 25514214 ~ 25519748 (+)
G23069 NA non-coding upstream 270107 25430474 ~ 25434548 (+)
G23096 NA non-coding upstream 283525 25420272 ~ 25421130 (+)
G23095 NA non-coding upstream 284880 25418670 ~ 25419775 (+)
G23139 NA non-coding downstream 63163 25769381 ~ 25775147 (+)
G23142 NA non-coding downstream 73198 25779416 ~ 25787023 (+)
G23149 NA non-coding downstream 122746 25828964 ~ 25830444 (+)
G23151 NA non-coding downstream 128165 25834383 ~ 25835141 (+)
G23152 NA non-coding downstream 140891 25847109 ~ 25853243 (+)
G23121 rsad1,LOC107755174,LOC107690008,LOC107670671 other upstream 42338 25661048 ~ 25662317 (+)
LOC122336634 NA other upstream 88750 25613159 ~ 25615905 (+)
LOC122331665 rsad1,LOC107690008,LOC107755174 other upstream 127612 25573757 ~ 25577043 (+)
tob1a tob1a,LOC107690006,LOC107758110,LOC107555665,LOC107583660,LOC107728672,LOC107670673 other upstream 135252 25524309 ~ 25569403 (+)
G23061 rps2,LOC107758112,LOC107690003,LOC107555664 other upstream 257385 25411918 ~ 25447270 (+)
LOC122341783 arl16,LOC107583744 other downstream 126287 25832505 ~ 25834198 (+)
G23146 NA other downstream 130925 25837143 ~ 25850576 (+)
LOC122341383 tom1l2 other downstream 188372 25894590 ~ 25911625 (+)
LOC122341778 gid4,LOC107724729,LOC107555661,LOC107713949,LOC107559524,LOC106601817,LOC101065567 other downstream 241836 25948054 ~ 25952747 (+)
pitpnc1a pitpnc1,LOC107665814,LOC107691236,LOC107752702,LOC107743029,LOC108412868,LOC108274028,LOC107376579,LOC106903613 other downstream 944611 26650829 ~ 26705731 (+)

Expression


Co-expression Network