G18933


Basic Information

Item Value
gene id G18933
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10485148 ~ 10487561 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21264
TGGAAAAAACTGCTCAAGCCGTTCCAAAAACCAAAGGTGGTGACAATAGCAAAAGACAACGTCCAATTATAAATATTAAATGGGTTCAAATTTGACTTGTTTAAGTGGTCCTGAATGTGCACTCCGGTTCTATCAAAATGATATTAGATACAAAATAAACCCTGAGAAGAAACTGTGATCAACATTAATTGTTCAAAATAAACGTTTAACATACAAGAAAATGGTTAAAGGATAAATAGTAAATGTAAGTTTTAATAAGAACATCTTTAAAAGTCAGTCCTTGTATATTTTGAGGTTTTTGAACACTTTCTTTGTTGCGCAGCTTGCTTCACATCATTCCTGTTTTTCCAAAGATCCTGATTATCCGTCTCAGTAGACATCAAAGTTAAACTTGTATCAAAAGATGTGCAGAGATGCAGTTTCAGTAAGAGAGGTTGGGACACTACTGAAGGCACAGTAAAACATGAGCGTACATTCAGAGATGATGTGAAGTAGTAGTCAAATCAAACAAATGCACAAAAAACTCAAAATATTTCAGAAATTTCCTTTAAATTCCAGAATCATGTCTAAAAATATGTTACCAGGATATTCTAACAACTGTCTTCTGTTGTTTCATGTTCAAAACATTTCTACAAACCTCAAAACAAGTTTCTAATCACATTCGGATGGCATGATGACAGTTCGGCAGGGTGAAGATCTGTGACATTTTCAGAAAAAGAAAAAAATACAGCAAAATAATATTTACACTGGCCCACTGATTTATCAATATTTTTGGTGCTGATTATGGACATAATCATCAAAGGAGAAGACTAAAAAAATATTGTTGCCATTACATAAAATTACAAGAAAATGTTATATTTAACTCTTCTAGAATGGAGTATTTATATATATAAAAAAGCAAAACTAAAGTATATTGACAATACAATTAATATTATTGATAAGTGGAGGGGGGAAAATAAAATGAACAATAACATTGACATAGCAATAGAATACATTAACTTTATCACATTGCTAATATAAGCATCAATGAAAAATAACATGTAAGTATTTTTGTACAAGGTGTGCCAGGAAAGATTCCAATGCAATTTCTTCCTTTTGAGGAAAAAAAAAGAAAAGAAAAGATAATAATAAAATAATAAAACACCAAATATATACACTGAACCTACAGAATCACCCATCAGATCTCAAACTGCTCTAAAATCAATTTCCGTGTTCTTTACAATTACTAAAATGTGTACCACTGAACTCAACCCTACGGTTACACTCGGAGCTGAACTAGAGATGGGATGGACAACAAGACAACTACGGCCAAACGCTGGCAGGACATCATACTGCCCATGATGCTGAGTGGAAAACAAACAAAACAAAACAAGACAAACTTATATAAAATATATACACATCTAAAATACATTTGTTGATAAAAATGTGTTAGTACACTACGGTAAAAACATTATTTAACAAGCAAAGAGACGTTACTACAGGACTTCATCTACAGCAATTACGGTCAATGGTGTATCAAATCGCCTTCTGTGGTATAAAACAACTTGATATGAACACATACTAGATGAAGCATGTAAACAAATAATATGCATGGCTTTAGGAGGAGATTAGACTGGGACGTTACAAATTGCTGAGCTGATGACTGAAGAAATAGACATTTCAGAACAAACAACAATCTCAATCCTAATTTTGGGAAGTCAAATCTTCAAATAAACCAGTCAAAGATCTTCTGAACAATGTTGTAATCTTGTTTTTGAAGGCAATTTGATCTAACATCAAGTGCTCCTCGGAATTTAGCTATTTTCTAGAAATATACAATGTTAAAACTAAATATTAACTATGAGACAAAGAGGGTTTAGGTGGAGTGTACATGTATGCAGCTCATTTTTAAAGGTGAAGCACTGAAAATGTTGGAAAAAAAATACCAATATTACAGTCATCACTCACTGGTATCCATTAATAGTTTAATGTATCCATCTGTTTAGCTCTATTTGCTTTTCAAATAAAATTTCTATTCTAAAACACCATGCTAAATGGATTTCACTTGAATTTTCTCACAGCAAGTTACCATTCTTTTCACTTTTTCGCCCTGATGAAGCAAATAAAACCAGGCAAGCAGAACATTAACCATAAAACAGTCACATAATTTAACTTCAGGTCCTCTCATCCTTATTCGTTTTCTCCACCTCTATTGTTCCCTGCAGTCTCTTCTCCATATTATCAATCTACAGGAGAAGCTTGCCGTTTCGATGTATTTTCAGAATTTTTCCCAGTCTCTGTTTAGCTGTGGCAAGTCCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21264 True 2300 lncRNA 0.33 3 10485148 10487561

Neighbor

gene id symbol gene type direction distance location
CI01000001_10420931_10426716 NA coding upstream 58001 10420318 ~ 10427147 (+)
CI01000001_10395420_10396473 NA coding upstream 88675 10394851 ~ 10396705 (+)
CI01000001_10328133_10329110 NA coding upstream 156038 10328040 ~ 10329110 (+)
CI01000001_10321783_10325266 NA coding upstream 159843 10321647 ~ 10325305 (+)
CI01000001_10150798_10152858 MIPA coding upstream 332210 10150373 ~ 10152938 (+)
CI01000001_10525795_10530510 WNT1 coding downstream 35701 10523262 ~ 10530543 (+)
CI01000001_10538498_10539667 RPS26 coding downstream 50827 10538388 ~ 10539846 (+)
CI01000001_10573770_10582123 LMBR1L coding downstream 86209 10573770 ~ 10582238 (+)
CI01000001_10582439_10582802 NA coding downstream 94817 10582378 ~ 10582821 (+)
CI01000001_10590766_10595793 DHH coding downstream 102875 10590436 ~ 10596238 (+)
G18929 NA non-coding upstream 44777 10437326 ~ 10440371 (+)
G18969 NA non-coding upstream 48275 10436653 ~ 10436873 (+)
G18968 NA non-coding upstream 49153 10435770 ~ 10435995 (+)
G18967 NA non-coding upstream 50606 10434219 ~ 10434542 (+)
G18951 NA non-coding upstream 51388 10431957 ~ 10433760 (+)
G19011 NA non-coding downstream 11072 10498633 ~ 10500815 (+)
G19026 NA non-coding downstream 50241 10537802 ~ 10538016 (+)
G19029 NA non-coding downstream 65783 10553344 ~ 10553661 (+)
G19030 NA non-coding downstream 66128 10553689 ~ 10553969 (+)
G19009 NA non-coding downstream 98395 10585956 ~ 10586294 (+)
G18937 NA other upstream 8759 10474984 ~ 10476389 (+)
G18872 NA other upstream 203779 10271146 ~ 10281369 (+)
G18873 NA other upstream 224434 10223879 ~ 10260714 (+)
G18896 NA other upstream 243656 10239900 ~ 10241492 (+)
G19039 NA other downstream 363363 10850924 ~ 10853983 (+)
G19314 NA other downstream 1013633 11501194 ~ 11558673 (+)
G19395 NA other downstream 1193761 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 3025843 13514115 ~ 13517063 (+)

Expression


Co-expression Network