G20136


Basic Information

Item Value
gene id G20136
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10539027 ~ 10539850 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU22618
TTCACACCATTTTTTTGCCTTAAATGTAGAAACTTAAATTTAAGGTCCAACATTTATTTTTTCCCCATATAACCTTTCTTACATTAGATGACAGCAAATTTTCATTTGATTAAACAAGAGAACATATTTTAGTTTTAGTCACCTTTATTTCTTTACATAAAAATGTATGCAAATATCTCCAGATCACATTGGTTTTGGAGGGGCTCGTGGGGGACCACCAGCGGGCCTGAAGCGTGGAGGAGGCGTACGGTCCTTCCTGGCCTCACGAGAGCGGTTCCTCACCACTTTGCTGTGGATGGCACAGCTGACACAGTAGTGCAGCTTCACATACAGTTTGGGCAAAACGTAGGCTGTAGAAGGACAAAGTATTTTAAAATATTTTTAAAAAACTCTGTTTGTTCCCCTCCCTAAGAAGCCCAGTGTCTTACTCACAGTCAAACACACTGGCTTCAGAGATGTCCCTTACAGCCGCAGCCTCCACGATATTTCTGATGACAAACTTCTTGATGGCCTTGTCCTTGGGCACACACCGGGCACAGTTTGTGCAGCGGATGGGCTGGACATGCCCACGTCCCTTCTTGGCACGACCGTTATTCCTCCTCTTCTTAGTCTGGGAGATGGAGAAATACAGTTTGCAATGGGTTACAAATAACAACCTTGAAACTGTG
>TU22623
TTCACACCATTTTTTTGCCTTAAATGTAGAAACTTAAATTTAAGGTCCAACATTTATTTTTTCCCCATATAACCTTTCTTACATTAGATGACAGCAAATTTTCATTTGATTAAACAAGAGAACATATTTTAGTTTTAGTCACCTTTATTTCTTTACATAAAAATGTATGCAAATATCTCCAGATCACATTGGTTTTGGAGGGGCTCGTGGGGGACCACCCAGCGGGCCTGAAGCGTGGAGGAGGCGTACGGTCCTTCCTGGCCTCACGAGAGCGGTTCCTCACCACTTTGCTGTGGAGTCAAACACACTGGCTTCAGAGATGTCCCTTACAGCCGCAGCCTCCACGATATTTCTGATGACAAACTTCTTGATGGCCTTGTCCTTGGGCACACACCGGGCACAGTTTGTGCAGCGGATGGGCTGGACATGCCCACGTCCCTTCTTGGCACGACCGTTATTCCTCCTCTTCTTAGTCTGGGAGATGGAGAAATACAGTTTGCAATGGGTTACAAATAACAACCTTGAAACTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22618 False 668 lncRNA 0.44 2 10539027 10539850
TU22623 True 532 TUCP 0.40 3 10539027 10539850

Neighbor

gene id symbol gene type direction distance location
CI01000001_10513629_10520878 WNT10B coding downstream 17973 10513563 ~ 10521054 (-)
CI01000001_10503104_10506678 ARF2B, ARF3A, ARF2A, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF5.L coding downstream 30692 10502661 ~ 10508335 (-)
CI01000001_10487487_10496560 PHF8 coding downstream 42467 10487225 ~ 10496560 (-)
CI01000001_10475281_10484892 NA coding downstream 54135 10474986 ~ 10484892 (-)
CI01000001_10460515_10473374 PFKMA coding downstream 65653 10459964 ~ 10473374 (-)
CI01000001_10542497_10550979 IKZF4 coding upstream 2081 10540670 ~ 10550979 (-)
CI01000001_10556067_10557569 DNAJC22 coding upstream 16154 10556004 ~ 10558535 (-)
CI01000001_10638148_10656332 ACV1B, ACVR1BA, ACVR1BB, ACVR1B coding upstream 98250 10638100 ~ 10657269 (-)
CI01000001_10658398_10672912 ACVRL1 coding upstream 118542 10658392 ~ 10673477 (-)
CI01000001_10676846_10683262 ANKRD33AA coding upstream 136672 10676522 ~ 10684044 (-)
G20152 NA non-coding downstream 7899 10530775 ~ 10531128 (-)
G20068 NA non-coding downstream 20181 10467635 ~ 10518846 (-)
G20061 NA non-coding downstream 122499 10378635 ~ 10416528 (-)
G20062 NA non-coding downstream 161321 10370339 ~ 10377706 (-)
G20106 NA non-coding downstream 313650 10224882 ~ 10225377 (-)
G20153 NA non-coding upstream 14158 10554008 ~ 10555307 (-)
G20156 NA non-coding upstream 21785 10561635 ~ 10561980 (-)
G20168 NA non-coding upstream 45952 10585802 ~ 10586005 (-)
CI01000001_09804494_09811219 NA other downstream 718131 9804429 ~ 9811219 (-)
G18223 NA other downstream 2610510 7926104 ~ 7928517 (-)
G18023 NA other downstream 2781507 7756501 ~ 7757520 (-)
G17911 NA other downstream 3285773 7251311 ~ 7267952 (-)
CI01000001_06932075_06937182 NA other downstream 3601804 6931621 ~ 6937231 (-)
CI01000001_10862471_10864514 NA other upstream 322375 10862225 ~ 10865770 (-)
G20230 NA other upstream 482277 11022127 ~ 11028777 (-)
G20319 NA other upstream 570987 11110837 ~ 11114747 (-)
G20315 NA other upstream 580302 11116755 ~ 11120830 (-)
CI01000001_12878462_12899012 NA other upstream 2333548 12878365 ~ 12899469 (-)

Expression


Co-expression Network