G19009


Basic Information

Item Value
gene id G19009
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10585956 ~ 10586294 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21344
AGGAAGACAGGCAATCTTCCACAGTTTGCGATAGCCTATCGTTATTGTCAAAACACAAGAATGAAGGGGGAAATAGGCAGATTAGCTTTTCTGGTGGTTGTTTGAAGTGTGTGCCAAAGTGCATTAGAAGATATTATTCCTTCTGGAAAATAGAAAACTCTCGGCCGGAAAAGACTTGCTAATCAACTGATTATGGACCGCGCTGCCCGCCTGCAATGGCACATCCACACCCTCCTTGCACACTCATGACACACTCCCTTCACACACTCAAGAAAGAGCCGTTCTCACAAAGACCCCAAGAGGTGTTTTTGAAAGAAAAGAACTGACATATATGGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21344 True 339 lncRNA 0.45 1 10585956 10586294

Neighbor

gene id symbol gene type direction distance location
CI01000001_10582439_10582802 NA coding upstream 3135 10582378 ~ 10582821 (+)
CI01000001_10573770_10582123 LMBR1L coding upstream 3718 10573770 ~ 10582238 (+)
CI01000001_10538498_10539667 RPS26 coding upstream 46254 10538388 ~ 10539846 (+)
CI01000001_10525795_10530510 WNT1 coding upstream 55413 10523262 ~ 10530543 (+)
CI01000001_10420931_10426716 NA coding upstream 158809 10420318 ~ 10427147 (+)
CI01000001_10590766_10595793 DHH coding downstream 4142 10590436 ~ 10596238 (+)
CI01000001_10604980_10633286 KMT2D coding downstream 17594 10603888 ~ 10633540 (+)
CI01000001_10688354_10691353 NA coding downstream 101568 10687862 ~ 10691409 (+)
CI01000001_10694664_10713151 NA coding downstream 108173 10694467 ~ 10714684 (+)
CI01000001_10715529_10716091 NA coding downstream 128820 10715114 ~ 10716910 (+)
G19030 NA non-coding upstream 31987 10553689 ~ 10553969 (+)
G19029 NA non-coding upstream 32295 10553344 ~ 10553661 (+)
G19026 NA non-coding upstream 47940 10537802 ~ 10538016 (+)
G19011 NA non-coding upstream 85141 10498633 ~ 10500815 (+)
G18933 NA non-coding upstream 98395 10485148 ~ 10487561 (+)
G19008 NA non-coding downstream 12310 10598604 ~ 10598814 (+)
G18997 NA non-coding downstream 12732 10599026 ~ 10599251 (+)
G19041 NA non-coding downstream 68275 10654569 ~ 10654922 (+)
G18998 NA non-coding downstream 69093 10655387 ~ 10657271 (+)
G19080 NA non-coding downstream 228096 10814390 ~ 10815702 (+)
G18937 NA other upstream 109567 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 189251 10394851 ~ 10396705 (+)
G18872 NA other upstream 304587 10271146 ~ 10281369 (+)
G18873 NA other upstream 325242 10223879 ~ 10260714 (+)
G19039 NA other downstream 264630 10850924 ~ 10853983 (+)
G19314 NA other downstream 914900 11501194 ~ 11558673 (+)
G19395 NA other downstream 1095028 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2927110 13514115 ~ 13517063 (+)

Expression


Co-expression Network