G19041


Basic Information

Item Value
gene id G19041
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10654569 ~ 10654922 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21384
TTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCATTAATTACTCACCCTCATGTCGTTCCACACCCGTAAGACCTTTGTTCATCTTCAGAACACAAATTAAGATATTTTTGTTGAAATCCGATGGCTCAGTGAGGCCTGCATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATTAATGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAACATTATAAAGCCACGAGAATAACAAAATAACAAAATAACGACTTATATAGTGATGGCCGATTTCAAAACACTGCTTCATGAAGCTTCGGAGCGTTATGAATCTTTTGTGTCGAATCA

Function

NR:

description
putative nuclease HARBI1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21384 True 354 lncRNA 0.43 1 10654569 10654922

Neighbor

gene id symbol gene type direction distance location
CI01000001_10604980_10633286 KMT2D coding upstream 21029 10603888 ~ 10633540 (+)
CI01000001_10590766_10595793 DHH coding upstream 58331 10590436 ~ 10596238 (+)
CI01000001_10582439_10582802 NA coding upstream 71748 10582378 ~ 10582821 (+)
CI01000001_10573770_10582123 LMBR1L coding upstream 72331 10573770 ~ 10582238 (+)
CI01000001_10538498_10539667 RPS26 coding upstream 114867 10538388 ~ 10539846 (+)
CI01000001_10688354_10691353 NA coding downstream 32940 10687862 ~ 10691409 (+)
CI01000001_10694664_10713151 NA coding downstream 39545 10694467 ~ 10714684 (+)
CI01000001_10715529_10716091 NA coding downstream 60192 10715114 ~ 10716910 (+)
CI01000001_10749174_10779222 ARHGEF25A coding downstream 94252 10749174 ~ 10779454 (+)
CI01000001_10807407_10818870 SLC26A10 coding downstream 152398 10807320 ~ 10820053 (+)
G18997 NA non-coding upstream 55318 10599026 ~ 10599251 (+)
G19008 NA non-coding upstream 55755 10598604 ~ 10598814 (+)
G19009 NA non-coding upstream 68275 10585956 ~ 10586294 (+)
G19030 NA non-coding upstream 100600 10553689 ~ 10553969 (+)
G19029 NA non-coding upstream 100908 10553344 ~ 10553661 (+)
G18998 NA non-coding downstream 465 10655387 ~ 10657271 (+)
G19080 NA non-coding downstream 159468 10814390 ~ 10815702 (+)
G19087 NA non-coding downstream 219060 10873982 ~ 10874233 (+)
G19088 NA non-coding downstream 219748 10874670 ~ 10874871 (+)
G19034 NA non-coding downstream 237515 10892437 ~ 10896905 (+)
G18937 NA other upstream 178180 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 257864 10394851 ~ 10396705 (+)
G18872 NA other upstream 373200 10271146 ~ 10281369 (+)
G18873 NA other upstream 393855 10223879 ~ 10260714 (+)
G19039 NA other downstream 196002 10850924 ~ 10853983 (+)
G19314 NA other downstream 846272 11501194 ~ 11558673 (+)
G19395 NA other downstream 1026400 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2858482 13514115 ~ 13517063 (+)

Expression


Co-expression Network