G19034


Basic Information

Item Value
gene id G19034
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10892437 ~ 10896905 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21375
TCTTTTTTCCCCCTGTGGTAACTCCAAGTTTCTCTGATACCAAGTATTTCCATAATTTTCTGTGTTTGATTTAAATTACATCTATAATATTTTACTCACATATGCATCTATTGGTTGATTTCCTTATTGCAATAAACAAGAGTAGCCAGTATGAGTTGAATATTGCTACGTTCAATCACACATACTGTTTTCCCATCTGACAGTTTAATTCAAAAATAACTTTATTGGCAAGACGAGGTTTGACCGAAGCTTCTCCGTCCGCGTCTGCTCCTGGAGAGGCCTGGGGTGGAATAAGGCTAAGGCTAAAATAGATTTCACCAACTAACATTACACCTGCCCTGAAAGGTTGAATAAATCTACCAAAGACAATTCTGTACAGTGATGACATAGTTCTCACTACAGGATGAACATGGTCTTTACAGTGTTGACGGATGGGACTAAGCGAGTCTGTCTCAAGCCTGTGGAGTGTGTTAGCTGTGATGGCTTTATCACCTCACATGGTTTCAATGGGGCACTGGACACCTGGTTTCAAACTACAGCATGTGTCAGTGCGCATAATAGTGTTACCACAAAATGCTCATCTGAAATCAGCCGAATACTCCGTCCACTGATTGTTTTAATAATTAAGTTTGGGATAGAAACAGCTGATTGCAAATGTGCAGTTTACAGGAATAGGTCATCCCAAAAATAAAAACACTGTCATTATTTACTCAACCTCATGTTCGTCCAAATCCACAGGCTGTTGTTTTTTCTCATATTCTGATTTTACAACAGAAGTAGGGTACCAATGTCAATGGTCTATACTGTAAAAACTACGATTCAGACAACTTTACTGTTTAAATAATGTAGGTTTTGACAAAAATAAAAAGTTTTAGAAAATGATAAATCTCACATTTCAGTCTAATAAACAATGTATGTATGTTATATAGACGGTGTGTAGCCCCGCCCCTTTCCAGCGCTGCGCTCTTTGTGTTCTGTCTTCCGGTTTGTATATTTACACAGCATGAAGGTAAAATCTTATGGATTTATGAATGAAACGCTCGTTTTGAAATCTTCCCGGTTTACTGACATTTGTTATGACACCCGCTTCAAACATTATAATGCTCATGATAAAAAGGGTTAGTTCACCCAAAAATAATGTCATTTATTACTCACCCTACATTATGAATCTTTTTCAGCAGTTTGGCGGTTTGACACGCGATCCGAATCATGATTGGACATACTGATTCATAACGCTCCGAAGCTTCATGAAGCAGTGTTTTGAAATCGGCCATCACTATATAAGTCGTTATTTTGTTTTTTTGGCGCAGCAAAAATATTCTCGTGGCTTTATAATATTAATATTGAACCACTGTACTCACATGAACTGATTTAAATATGTTTTTAGTACATTAATGGATCTTGAGAGAGGAAATGTCATTGCTGGCTATGCAGGCCTCACTGAGCCATCGGATTTCATCAAAAATATCTTAATTTGTGTTCCGAAGATGAACGAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATAAATGACATTATTTTCATTTTTGAGTGAATTAACCCTTGTTGACAGCGATACCATATAAATATACAGAGCTACCGCAGAAACGGAAGTTCAAACACACACACACAGATGGCTGCGCACTTGTTTTTCTGGCTCGTAACAGACAGGCTGAATTAAAATGTAAAATCACTCTCGGACAGTAGGTGGCGGTCTGAATTTCAATGACAGAATGGCAAATTTGCTGAAAGACGACGAGTTTGTAGGTATGATTATTGTATTTATCGCCACAAAAAGACTAATTTTGGACATTTTTTGGTGCTTGACACCCCCTGGTCACTATAAACTGTTGTTGTACTGTGATTCTTCATAAATATCTTCCACTGAAAAAAATAATAACAGCATATGGGTTTGAAATTACATGAAGGGTGAGTAAATGACAACAGAAGATTGATCTTTTAGTGAACAATCCCTTAAAAGCAGATTCTGCTCATCGAACCGGATTCTATCCGTACGCACACGACACTACACGATACACACCGACATGAAACTACACCATACTAGTGCCTCGGTAACTAATGAGAAACAGAGGTAAAGTTTCATCAAAGCACAATGGTGGATGCTAACCACAGTTAGCATGAAGTAATGGCATTATCATGACGCTTTCCACACAATGCAAACAATGCCACGAAGAAACAAAAAGGTAAACTAAGCTACATACGCAAAGGCTATGGCTGACTACACATTGTTTGTGTTCAGATATACCCTGTCCCCCCACTCAGAGATGAGAAAAGACCCTTTAATATGAAGGGCCCGTCCCTGTGGGTGCCCCTTTCTTACTTTTTAAACTCCCAGCTTTTGTACTGGAAAGGCTAATTTATCTCTGTGGAAGAACATGGAGGCCTATTAGCAGCCGTACAGAACCATTTATAAATGATCTTCTACAACAAATGACATAATTCAATTGCTTATTGCATTGCAATATCCAAACAACAGTAAGACATTGTCACACTTTGCTTATCCAAACAACAGTAAGACATTGTCACACTTGAATTATCAATGGAAGACTGCCGCATAGTTCCACCAACACGACAGGCTCTAGTTTGATGTTTATCTGTATTATTTGTAGTTCACTTCCCCCAAATATGCTTTCTACAACGGGTAAGCCACATCTCGATCCCATCCGAGTGCAGGTTTTCAATCTTCCATAGAAAAATATTCTTGTTTTTTTCTTTTGTTCAATGACTTTTTTTGTCAGAATTTCCACAACGATATTTGTTCAACGTAACAGTGTACTATGAAAACGAACCAAAAAAAAACAACATCAAAACAATTAATTGATCATATTAAAAACAAAAAAAATAATAATATGCATTGCATGGCTTTAGATTCAAGACAGGAAGTTCATACCAAAAAAAGGAGAGATTGCACAGTCGTGTCCTTAGTGACCTCCTCTGCGTCTTCACTCTGTTCACTTTTCTAGACTCTTGGGGTTCGGCTGGAGTGGCTGACCTGCGGCGTCAGTCCTTGCCGGGATGCAGGCTGACTCGTGAGACTGAACGCAGAAGTCGGACAAAAGTGGGGGCCGTATTGCTAGGGGGTTGCATAATGTCCACCGAACATACAGAGACAAAATGAACAGAGGAGCCTGTATGTACTGTTAGTCCAAGTGTGTGCTTAGGTTTGTTGCCTTTCTCTGAGAATCAAAGTACCCGTCCATCTTATTTCAGCATCTACCAGCAGTTACATCATTCTCTACGCACATATTTCACTTCTGAATATTTTTCTAAAGTCAACCAGCTTGGATGTTCTGAACTAAACTACGCTACGCAATAGAATAAATAGACATCTACTGAGTTTTTCTAAGATCTAAGACAGAGGTCTGGGGTTTTTCAGTCAACCGCTCTTGGCGCTAACGGATGTAAAAGTGACACAAAAGAGATCTCGAGTATCTCTTCTGCATCTCTCCGTTTCCCTAGAGAGATGCGACCGTATGAAGTCGACGAAGCTAAGCTTCTTACGCTCATTTTGAACCAGCATTCGGAAAGAGTCGGGCATCCTTAGACCTTCCCCACAATCCCCTGCTGTGACATGGTGGAACTGCGACTGAGATTGTGGCGTTTTCCTCTTGCAAAGATGCCAAAGCCAGACAGGACAATTTGAATACAGCAAATACTACGAGAAGCGTACTGATGTAACATGGTTTCTGTAGGTTTCTCAAGGTGCATAGGGTTGAGGGTGCATTTATTCAGAACAACAGAAACATTTAACTGCAGTCTTTGTGTGTTGGTTTGTGTGTTTTGGGGTCTCTAGAAAGTTGCCTAACTCATTCCAGCATGTCTGGCTACGATGTGACTTCTGCTACCTCACAGTATGAGTATAAATAGAGGGAAGGAACAAGGATGTCAGATACATACAATATTGCTCTATTCCAACAATCCCTGCATTTGTCCATTCATCCACCAACGAATAAATCACTCAAACCAAACGGACAGAGATGGAGGAGGCAGTTAAGGGTGATGGAAAGAGAGTTGGAACGCCAGTTGCACCCTCCTTCGTGATTGATCCCACTTTGCGCCCCCTTCTGCTTGGTTTGATGATTGACGTTATTGTTGATGAGCCGATTCTAGTCATTATTTTTTCTTCTTCACAGTGTGCTTTTGGAGGTGAGGCTCCGGACTGGCTGTGATTGGCTAAGGGGGGTGTGGGTGGAGTCAGTACGGTGAGAACAGGATCGGACCGTGTGAGGTGCGTATGGGCCCCGGAGCTGGTCTCAAGATGGCGTGACTGAGGGGCGGACCCTGGAGGAGGTGATGATGTGGATGGGGGGCGGGGCCTGCTGCGCGGAGAGCCAGCGGATTGGAGGAGGCGGCCGCTGCCATTGCTGCAGCAACGGCCAGAGGACTCGGCAGGAGGCCGGCGCCTAATGCTTTGGTGAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21375 True 4448 lncRNA 0.42 2 10892437 10896905

Neighbor

gene id symbol gene type direction distance location
CI01000001_10856786_10861403 C1GALT1A coding upstream 30299 10855960 ~ 10862138 (+)
CI01000001_10807407_10818870 SLC26A10 coding upstream 72384 10807320 ~ 10820053 (+)
CI01000001_10749174_10779222 ARHGEF25A coding upstream 112983 10749174 ~ 10779454 (+)
CI01000001_10715529_10716091 NA coding upstream 175527 10715114 ~ 10716910 (+)
CI01000001_10694664_10713151 NA coding upstream 177753 10694467 ~ 10714684 (+)
CI01000001_10968536_10981345 NA coding downstream 71439 10968344 ~ 10981787 (+)
CI01000001_10989337_10992917 BIRC5B coding downstream 92432 10989337 ~ 10992978 (+)
CI01000001_11019871_11028065 MYL6, MYL6B coding downstream 122574 11019479 ~ 11028524 (+)
CI01000001_11099313_11137500 HUWE1 coding downstream 202408 11099313 ~ 11138278 (+)
CI01000001_11138617_11139541 NA coding downstream 241380 11138285 ~ 11139673 (+)
G19088 NA non-coding upstream 17566 10874670 ~ 10874871 (+)
G19087 NA non-coding upstream 18204 10873982 ~ 10874233 (+)
G19080 NA non-coding upstream 76735 10814390 ~ 10815702 (+)
G18998 NA non-coding upstream 235166 10655387 ~ 10657271 (+)
G19041 NA non-coding upstream 237515 10654569 ~ 10654922 (+)
G19130 NA non-coding downstream 28623 10925528 ~ 10986466 (+)
G19121 NA non-coding downstream 173999 11070904 ~ 11126159 (+)
G19226 NA non-coding downstream 272388 11169293 ~ 11183770 (+)
G19096 NA non-coding downstream 358164 11255069 ~ 11304024 (+)
G19108 NA non-coding downstream 484669 11381574 ~ 11381987 (+)
G19039 NA other upstream 38454 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 352591 10538388 ~ 10539846 (+)
G18937 NA other upstream 416048 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 495732 10394851 ~ 10396705 (+)
G18872 NA other upstream 611068 10271146 ~ 10281369 (+)
G19314 NA other downstream 604289 11501194 ~ 11558673 (+)
G19395 NA other downstream 784417 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2616499 13514115 ~ 13517063 (+)

Expression


Co-expression Network