G19226


Basic Information

Item Value
gene id G19226
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11169293 ~ 11183770 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21596
GTAAAAGTCTTAAAGTATCTGATTTTAACAGTATTTTACTCGTGCTGAATGTAGGCTCAGAGATGCACTAGTCCTGAGAGACATGCCAGTGAAAATAAGAAACAATTGATTTGTAAGATGAGAAATCAAGTTTATTTTCTAAAATCAAAATAAAACTGAACACCTCAATGCTGCAATAAATCAAGGTCGACACAACAACCTTTTAAACGTCAAGTCTCAGTTGAGCTCAAGTGCACAGAAAGGTCATAAGTAAACCAATGTCCTTCAAAACGGTCTTGTCAATATAGCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21596 True 290 lncRNA 0.36 2 11169293 11183770

Neighbor

gene id symbol gene type direction distance location
CI01000001_11138617_11139541 NA coding upstream 29620 11138285 ~ 11139673 (+)
CI01000001_11099313_11137500 HUWE1 coding upstream 31015 11099313 ~ 11138278 (+)
CI01000001_11019871_11028065 MYL6, MYL6B coding upstream 140769 11019479 ~ 11028524 (+)
CI01000001_10989337_10992917 BIRC5B coding upstream 176315 10989337 ~ 10992978 (+)
CI01000001_10968536_10981345 NA coding upstream 187506 10968344 ~ 10981787 (+)
CI01000001_11216246_11230227 SMC1A, SMC1A.L, SMC1AB, SMC1AL coding downstream 32476 11216246 ~ 11230321 (+)
CI01000001_11232168_11238289 SRM coding downstream 48398 11232168 ~ 11238655 (+)
CI01000001_11246797_11247315 CORT, SST3 coding downstream 62879 11246649 ~ 11247541 (+)
CI01000001_11265638_11283027 MASP2 coding downstream 81868 11265638 ~ 11283236 (+)
CI01000001_11359106_11376288 NA coding downstream 175336 11359106 ~ 11376885 (+)
G19121 NA non-coding upstream 43134 11070904 ~ 11126159 (+)
G19130 NA non-coding upstream 182827 10925528 ~ 10986466 (+)
G19034 NA non-coding upstream 272388 10892437 ~ 10896905 (+)
G19088 NA non-coding upstream 294422 10874670 ~ 10874871 (+)
G19087 NA non-coding upstream 295060 10873982 ~ 10874233 (+)
G19096 NA non-coding downstream 71299 11255069 ~ 11304024 (+)
G19108 NA non-coding downstream 197804 11381574 ~ 11381987 (+)
G19258 NA non-coding downstream 203873 11387643 ~ 11387959 (+)
G19259 NA non-coding downstream 205785 11389555 ~ 11389858 (+)
G19266 NA non-coding downstream 244334 11428104 ~ 11493856 (+)
G19039 NA other upstream 315310 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 629447 10538388 ~ 10539846 (+)
G18937 NA other upstream 692904 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 772588 10394851 ~ 10396705 (+)
G18872 NA other upstream 887924 10271146 ~ 10281369 (+)
G19314 NA other downstream 317424 11501194 ~ 11558673 (+)
G19395 NA other downstream 497552 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2329634 13514115 ~ 13517063 (+)

Expression


Co-expression Network