G19108


Basic Information

Item Value
gene id G19108
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11381574 ~ 11381987 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21471
GGACAAAAGCTGTTTTAAACGCAAAGGGTGATAGAAGTTAATTGATCAGTAAAATCCCTTTATGACATTATTTTTGAAAGCATCCTCTCTTTACAGCATTTTTACACAAGTGCCTAAAACTTCTCACAGTACTGTATCTTTGCTGCAGTTCTTCTGGATTTAATTTGTCTCAATTTCATCAGTTTCTTCATTTAATCACAGACAGACTCTGATGGTGAGATCAGATTTCCGTGTGGAGCACCGGCTGTTGTCAGACTCCTTGTGCATACAAAAGATATCACTGGATTATTACAATTAATGGCAAAATGAATGTTTAGAAATATGAACTGACATTTCCTACTGATACACTACAGCAAAAGATATAAATAACTGGCTTAAAACCATTTTTGGGGGTGAAAATACTGACGTGGCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21471 True 414 lncRNA 0.30 1 11381574 11381987

Neighbor

gene id symbol gene type direction distance location
CI01000001_11359106_11376288 NA coding upstream 4689 11359106 ~ 11376885 (+)
CI01000001_11265638_11283027 MASP2 coding upstream 98338 11265638 ~ 11283236 (+)
CI01000001_11246797_11247315 CORT, SST3 coding upstream 134033 11246649 ~ 11247541 (+)
CI01000001_11232168_11238289 SRM coding upstream 142919 11232168 ~ 11238655 (+)
CI01000001_11216246_11230227 SMC1A, SMC1A.L, SMC1AB, SMC1AL coding upstream 151253 11216246 ~ 11230321 (+)
CI01000001_11431153_11431434 NA coding downstream 47889 11429876 ~ 11431587 (+)
CI01000001_11440491_11445508 NA coding downstream 57992 11439979 ~ 11445540 (+)
CI01000001_11656975_11660666 TARDBPL, TARDBP coding downstream 274042 11656029 ~ 11661866 (+)
CI01000001_11756218_11760009 NA coding downstream 374174 11756161 ~ 11761497 (+)
CI01000001_11809724_11812692 LZIC coding downstream 427440 11809427 ~ 11813444 (+)
G19096 NA non-coding upstream 77550 11255069 ~ 11304024 (+)
G19226 NA non-coding upstream 197804 11169293 ~ 11183770 (+)
G19121 NA non-coding upstream 255415 11070904 ~ 11126159 (+)
G19130 NA non-coding upstream 395108 10925528 ~ 10986466 (+)
G19034 NA non-coding upstream 484669 10892437 ~ 10896905 (+)
G19258 NA non-coding downstream 5656 11387643 ~ 11387959 (+)
G19259 NA non-coding downstream 7568 11389555 ~ 11389858 (+)
G19266 NA non-coding downstream 46117 11428104 ~ 11493856 (+)
G19312 NA non-coding downstream 118230 11500217 ~ 11500514 (+)
G19349 NA non-coding downstream 286977 11668964 ~ 11670995 (+)
G19039 NA other upstream 527591 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 841728 10538388 ~ 10539846 (+)
G18937 NA other upstream 905185 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 984869 10394851 ~ 10396705 (+)
G18872 NA other upstream 1100205 10271146 ~ 10281369 (+)
G19314 NA other downstream 119207 11501194 ~ 11558673 (+)
G19395 NA other downstream 299335 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2131417 13514115 ~ 13517063 (+)

Expression


Co-expression Network