G19258


Basic Information

Item Value
gene id G19258
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11387643 ~ 11387959 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21630
ACTAACCCTTTAAACATCAATTATCTTCTGATTGGCTGTGGCATAGCTCAGCAGTTTTGTGTTTAGTGTGGTTAGACAAATTGTTTGTTGTTGGAAACGTGTCAAATAATGTCTCACGTCCAAATTAAATTCAGATATAAAGGGTCCTTCTGAATGACATGTTTAACTATCACACACTTGAGATTAAGTATCGTTTAGGAGATAGAGGATGTGTCAAAAGTAAAGTTAAAGCAAACATATCTCTTTACATTCAACTATCTGCCACAAAATGTCTTTTAAAGTTTTCATGTCATGTACACAGACTTTTTTTCCCCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21630 True 317 lncRNA 0.34 1 11387643 11387959

Neighbor

gene id symbol gene type direction distance location
CI01000001_11359106_11376288 NA coding upstream 10758 11359106 ~ 11376885 (+)
CI01000001_11265638_11283027 MASP2 coding upstream 104407 11265638 ~ 11283236 (+)
CI01000001_11246797_11247315 CORT, SST3 coding upstream 140102 11246649 ~ 11247541 (+)
CI01000001_11232168_11238289 SRM coding upstream 148988 11232168 ~ 11238655 (+)
CI01000001_11216246_11230227 SMC1A, SMC1A.L, SMC1AB, SMC1AL coding upstream 157322 11216246 ~ 11230321 (+)
CI01000001_11431153_11431434 NA coding downstream 41917 11429876 ~ 11431587 (+)
CI01000001_11440491_11445508 NA coding downstream 52020 11439979 ~ 11445540 (+)
CI01000001_11656975_11660666 TARDBPL, TARDBP coding downstream 268070 11656029 ~ 11661866 (+)
CI01000001_11756218_11760009 NA coding downstream 368202 11756161 ~ 11761497 (+)
CI01000001_11809724_11812692 LZIC coding downstream 421468 11809427 ~ 11813444 (+)
G19108 NA non-coding upstream 5656 11381574 ~ 11381987 (+)
G19096 NA non-coding upstream 83619 11255069 ~ 11304024 (+)
G19226 NA non-coding upstream 203873 11169293 ~ 11183770 (+)
G19121 NA non-coding upstream 261484 11070904 ~ 11126159 (+)
G19130 NA non-coding upstream 401177 10925528 ~ 10986466 (+)
G19259 NA non-coding downstream 1596 11389555 ~ 11389858 (+)
G19266 NA non-coding downstream 40145 11428104 ~ 11493856 (+)
G19312 NA non-coding downstream 112258 11500217 ~ 11500514 (+)
G19349 NA non-coding downstream 281005 11668964 ~ 11670995 (+)
G19394 NA non-coding downstream 292748 11680707 ~ 11680946 (+)
G19039 NA other upstream 533660 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 847797 10538388 ~ 10539846 (+)
G18937 NA other upstream 911254 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 990938 10394851 ~ 10396705 (+)
G18872 NA other upstream 1106274 10271146 ~ 10281369 (+)
G19314 NA other downstream 113235 11501194 ~ 11558673 (+)
G19395 NA other downstream 293363 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2125445 13514115 ~ 13517063 (+)

Expression


Co-expression Network