G19259



Basic Information


Item Value
gene id G19259
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11389555 ~ 11389858 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU21631
TATTTTCAGTCAGCTGCGTCGAGAAAAGCTTTGAAGTGGAAGGGCTTGCCGCCATCTGGAAGATTGTGATGACAAGACACGTCCATCTTGGCTCAGAATTCAGTAATATTATTAGGTTGTTCCGACTTGGCATTGAGATGAATCCATCCATCCATCCATCCATCCCATTGACTACAACATAATCACTTATTAATATTTTGTTGGTTTGCATGTGTTCATAAATTCTTTGTATGACAGCCATGACAAAAATGATTATTTCTGCAGGTTTTGTTGCATTATCACAAATAAATCAATTGACTCCAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU21631 True 304 lncRNA 0.38 1 11389555 11389858

Neighbor


gene id symbol gene type direction distance location
CI01000001_11359106_11376288 NA coding upstream 12670 11359106 ~ 11376885 (+)
CI01000001_11265638_11283027 MASP2 coding upstream 106319 11265638 ~ 11283236 (+)
CI01000001_11246797_11247315 CORT, SST3 coding upstream 142014 11246649 ~ 11247541 (+)
CI01000001_11232168_11238289 SRM coding upstream 150900 11232168 ~ 11238655 (+)
CI01000001_11216246_11230227 SMC1A, SMC1A.L, SMC1AB, SMC1AL coding upstream 159234 11216246 ~ 11230321 (+)
CI01000001_11431153_11431434 NA coding downstream 40018 11429876 ~ 11431587 (+)
CI01000001_11440491_11445508 NA coding downstream 50121 11439979 ~ 11445540 (+)
CI01000001_11656975_11660666 TARDBPL, TARDBP coding downstream 266171 11656029 ~ 11661866 (+)
CI01000001_11756218_11760009 NA coding downstream 366303 11756161 ~ 11761497 (+)
CI01000001_11809724_11812692 LZIC coding downstream 419569 11809427 ~ 11813444 (+)
G19258 NA non-coding upstream 1596 11387643 ~ 11387959 (+)
G19108 NA non-coding upstream 7568 11381574 ~ 11381987 (+)
G19096 NA non-coding upstream 85531 11255069 ~ 11304024 (+)
G19226 NA non-coding upstream 205785 11169293 ~ 11183770 (+)
G19121 NA non-coding upstream 263396 11070904 ~ 11126159 (+)
G19266 NA non-coding downstream 38246 11428104 ~ 11493856 (+)
G19312 NA non-coding downstream 110359 11500217 ~ 11500514 (+)
G19349 NA non-coding downstream 279106 11668964 ~ 11670995 (+)
G19394 NA non-coding downstream 290849 11680707 ~ 11680946 (+)
G19351 NA non-coding downstream 292699 11682557 ~ 11687675 (+)
G19039 NA other upstream 535572 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 849709 10538388 ~ 10539846 (+)
G18937 NA other upstream 913166 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 992850 10394851 ~ 10396705 (+)
G18872 NA other upstream 1108186 10271146 ~ 10281369 (+)
G19314 NA other downstream 111336 11501194 ~ 11558673 (+)
G19395 NA other downstream 291464 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2123546 13514115 ~ 13517063 (+)

Expression



Co-expression Network