G19351


Basic Information

Item Value
gene id G19351
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11682557 ~ 11687675 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21750
TGGTTGTAATTTTATTTTTTACCTCATTCACTAAACAGGTCAATGGTGCAAGATTACCATACACAGAATTAAGATATATGCATTACACGTCTAGGCTATACAGCGAATGGATTATAATTATTACAAATACAGGAGACATATTTACATTTTAATCCAAGTTCCATACAACATGAAATATTTACAAAATAAGTATGAAAATGAAGCCAATCTGACAAATAATGTACAGTGTTAATGCCACGGCTGAACTGTTTTCTGTTGTTTCATCACAATGAGAGGGAATGATGTTCATCTGGAAACATTAGGCCTCTGATAGGGGTGATACAGTAAAGCCAGTGTTGCTTCAAAGGCAGCATGGGAAAAACGCATGAGTGAGCACAAAAACAAAGAGGTGAATGCATCAGGAAAAGCAAAACATGTCGTCGTATTTCTAGAAAATATATTCCCTGATGTTAGAAATGAAAATGAACAGGCCTCATCATAACTCTGCCCTCCATATCTAAACTAAATGTGAAAAAGTGCCCTTGTAACACGGTCAAACTCCTATAATAAGCACAGCAACATGTCAGTCCCTAATTAAGATATTTTTCTTCTTTCATCAATAATTCATGCATTTTTAGTGAAACCCAAGGTACATTCAAAGTCCACTTCAATGAGTAAAACACCACAACCTAAAACCATTTTGGTTTCCATTTGAGAAAACAACAAAAACATAGTTCAAGCTTTATTTGTTCTGTTGTTAGTTGTATAAACACATTATGTGCAAAGAGCTGCAAACTAATATATACATTGCAAAACAATAAATACAGTTAATGAAATTCATTATGAATATCACATTAGTCAACCAAGCCACTCAACAAAGATGGTAAATAAAAAAAGTCAAAAACCTTTGCCCTGGCAAATATTCATAACATCAACTCATGTAATTATATCAAAGCTATCCTTCAGTGCTCATTACGCACTCTATATGCCAGATCTGAATATTCAATTTGAACATTTTCACAGATGCTGTAACACTCCAACAGCTCAGATGAGGCCTACAGGCTGGCTGACCCAAGGACTCGACTTTCCGAGCCATTTTCATGTGTTTCCTGTGAAAATGCGCTAAAGCAGCAAGAATATTGACTTCATAAGGAATGACAGTGATCAACCTTCCTGTGACAATGAGTCCTGCTGGTTGTCTGACCAGAGGACTGTTATGTTGTCTGAAACTTCCATCAAGCTGAATCACTGCTAACTTCAGCACTTGTGCTTCGACTGCAAGTCTTCAAACATACAGAGCAAAGATTTTCAAAACAAAAAATAAAAAAGCAGAACGCAAACCATCCCTTTTCTCGCACTGCAACTGCACACTGCACTGCAGTGAACTGCATAAATGGCCCATTTCTACTGACAGTGATGAAACTGTTTTAGTGTCAAACTTCGGTCTAAGTAAATGAGAACGGCTGACTAAAAATGAGGAAAAGTGCCTTTCTTGCCTTTCGTTGTATAATGTAAAACACTGATCACATGTTAATAAAAATAAGTTAAGATAATCAGTAGAGATACATGGTAAATGTTCAATAATATTAAAAAGTGATGCTTAATTCTCAAGAAGAAAAAAGCCTGGTTTAACGATCCTGCTGACTTGAGATTTCTCTGGAAACAGCGAAAAATAATTGAATCCATCATTTCGAAACCGTAACCATTTAAATCAGTATCTCACTCAAGCGTTTGGTCTTCAGAAGAGGCAAAACCATCAGATCTTTCTTGCTAAAACAGCCCCGAAAATGGTGTTTTAGTAATACAGTAAGGACAGAAACCCATGAATAGCTGTATGCACAGTAATCCTGAACGTTATGTACATGTGGATTCATTCGGTCAGGTGTTCTGTGTCTAAGGTAATTCTTTTGCACCATTTTTTTAGCCTAATCTACTGAGGAAATTGTTTAAATCGAGCAGAATACTCCTGTAGGCTACCGAAAGAGTGATATGTGAGAGATCATCACCATCATTCCTTGGTATTATATGTCTTATGGTTACATACAGTACTTTGTTAATGGTATGTTTTACGTCCTTGATATGTGGAATTAATGTCAAGCAAATACATTACGACAGGCTGGGCGAGTAAACGGCTGTATGTACATGGTCAACATCCCGACTATCATGGCTTGCTTTGATTCAGCAAACCCATTAAGCCAATACTGCAGTAACATTCAGTTTAGGGGTCAATTTTCGTTTAGAAAATTAAGCATCTTCAAGAAGTGCGTTGGTCCATCTAAAAATCTTCTTCTTTTTTTTTTCAGCGATATCTTGAGCAAAGCTATTTGTTTTGTCTATCTTCTATCAGAGAAAGTTGATCATTAATTAAATATGTAATATTTTATATTATAATATATTATAACATTATATTTTTATTATTATTAATAATGTTTCTTTTTTATTCAATGCCTTGTTGTTGTTTTTTAAAGCAAGCCAACTTTCTCCTGAGGGTTGTGGCTCTTGCCACATGGGTAAGATGTTCCTGGCAGACAACACTGTAAGAATGATCTTCACAGACGAGAGTAACTCAAGAGAAAGCAGAACCTGCTCTGAAGATTCGTGCACACACAAATAGACTATTACAACATGCTACTTGAAGGAGGTTCAGTTATGACAAAGAACAAAAACTGAAGACAGAATAAATCCAATCAATAACACAATAGAGAGGGGGGGAGAGGAGAGAGTTGGTGTTCAGGAACTCAAAGTTCATTTGCTGGAGAGGAGAACAGAGCCACAGGTCTACATACAAGAGAAACTGTCAAGAACCACAAAGATTTAGAAGTGTTAACACACTTGGTACGTTGTAAAGGTAGACAGAGAGAAAAGAGCATGTGCGTGTGCGCTCGTTCAGTTCTTCATCAGGCCGGACCGTCTCCTCGCCAGCTTTGACCTTATCGTTCCTGCTAGGAGTGGATTAAAGGCGTACAGCCAGTCATTCATGTCTTTGTCATTGTTGGCCTGGAGGAGGATCCCTCTGTGCTTGGTGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21750 True 3008 lncRNA 0.37 2 11682557 11687675

Neighbor

gene id symbol gene type direction distance location
CI01000001_11656975_11660666 TARDBPL, TARDBP coding upstream 20691 11656029 ~ 11661866 (+)
CI01000001_11440491_11445508 NA coding upstream 237017 11439979 ~ 11445540 (+)
CI01000001_11431153_11431434 NA coding upstream 250970 11429876 ~ 11431587 (+)
CI01000001_11359106_11376288 NA coding upstream 305672 11359106 ~ 11376885 (+)
CI01000001_11265638_11283027 MASP2 coding upstream 399321 11265638 ~ 11283236 (+)
CI01000001_11756218_11760009 NA coding downstream 68486 11756161 ~ 11761497 (+)
CI01000001_11809724_11812692 LZIC coding downstream 121752 11809427 ~ 11813444 (+)
CI01000001_11898621_11898914 NA coding downstream 210622 11898297 ~ 11900188 (+)
CI01000001_11990189_11991073 AURKAIP1 coding downstream 300402 11988077 ~ 11991195 (+)
CI01000001_11994138_12003906 NA coding downstream 306463 11994138 ~ 12004100 (+)
G19394 NA non-coding upstream 1611 11680707 ~ 11680946 (+)
G19349 NA non-coding upstream 11562 11668964 ~ 11670995 (+)
G19312 NA non-coding upstream 182043 11500217 ~ 11500514 (+)
G19266 NA non-coding upstream 188701 11428104 ~ 11493856 (+)
G19259 NA non-coding upstream 292699 11389555 ~ 11389858 (+)
G19362 NA non-coding downstream 2250 11689925 ~ 11690609 (+)
G19411 NA non-coding downstream 68922 11756597 ~ 11758207 (+)
G19358 NA non-coding downstream 107129 11794804 ~ 11797310 (+)
G19353 NA non-coding downstream 126839 11814514 ~ 11814714 (+)
G19435 NA non-coding downstream 142857 11830532 ~ 11831123 (+)
G19395 NA other upstream 740 11681322 ~ 11681817 (+)
G19314 NA other upstream 123884 11501194 ~ 11558673 (+)
G19039 NA other upstream 828574 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 1142711 10538388 ~ 10539846 (+)
G18937 NA other upstream 1206168 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 1825729 13514115 ~ 13517063 (+)

Expression


Co-expression Network