G19438


Basic Information

Item Value
gene id G19438
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11852354 ~ 11876252 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21847
TGTGTCAGTCAGTAGCGAAGACTTTTACATTGAAAAGACTGAATTGTTGTGAACACGGAACAAGACACAACTGACAAATGCTTTGACTAGCGCTGTCAGTCACGGGAAAACCCCTTAACTGTTAAAAGGACAAGATAATACATCGGACATTTAAACAGATTTTTATTATGAACATAGGACTGACCTGAAGGAAAATGCTAAATCTGAATGCAGGTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21847 True 221 lncRNA 0.37 2 11852354 11876252

Neighbor

gene id symbol gene type direction distance location
CI01000001_11809724_11812692 LZIC coding upstream 38910 11809427 ~ 11813444 (+)
CI01000001_11756218_11760009 NA coding upstream 90857 11756161 ~ 11761497 (+)
CI01000001_11656975_11660666 TARDBPL, TARDBP coding upstream 190488 11656029 ~ 11661866 (+)
CI01000001_11440491_11445508 NA coding upstream 406814 11439979 ~ 11445540 (+)
CI01000001_11431153_11431434 NA coding upstream 420767 11429876 ~ 11431587 (+)
CI01000001_11898621_11898914 NA coding downstream 22045 11898297 ~ 11900188 (+)
CI01000001_11990189_11991073 AURKAIP1 coding downstream 111825 11988077 ~ 11991195 (+)
CI01000001_11994138_12003906 NA coding downstream 117886 11994138 ~ 12004100 (+)
CI01000001_12006266_12048809 DVL1A, DVL1B, DVL1 coding downstream 129676 12005928 ~ 12049045 (+)
CI01000001_12058281_12060612 NA coding downstream 181503 12057755 ~ 12061261 (+)
G19435 NA non-coding upstream 21231 11830532 ~ 11831123 (+)
G19353 NA non-coding upstream 37640 11814514 ~ 11814714 (+)
G19358 NA non-coding upstream 55044 11794804 ~ 11797310 (+)
G19411 NA non-coding upstream 94147 11756597 ~ 11758207 (+)
G19362 NA non-coding upstream 161745 11689925 ~ 11690609 (+)
G19488 NA non-coding downstream 10696 11886948 ~ 11887201 (+)
G19489 NA non-coding downstream 11216 11887468 ~ 11887883 (+)
G19490 NA non-coding downstream 11852 11888104 ~ 11888510 (+)
G19469 NA non-coding downstream 31365 11907617 ~ 11967369 (+)
G19512 NA non-coding downstream 115780 11992032 ~ 11992375 (+)
G19395 NA other upstream 170537 11681322 ~ 11681817 (+)
G19314 NA other upstream 293681 11501194 ~ 11558673 (+)
G19039 NA other upstream 998371 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 1312508 10538388 ~ 10539846 (+)
G18937 NA other upstream 1375965 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 1637152 13514115 ~ 13517063 (+)

Expression


Co-expression Network