G19512


Basic Information

Item Value
gene id G19512
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11992032 ~ 11992375 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21926
TTTAGAAAATATTTCTATTTTATATAAATGCTGTTCTTTTTAACTTTTTATTCATCAATGAATCCTGAAAAATCTATCACAGTATCCAAAAAATATTAAGCAACACAACTGTTTCCAACTTTGATAATAACTGAGTATCAAATCAGCATATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGATGAAAATTCAGCTTTGCATCACAGAAATAAATTATATTGTAAAGTATATTAAAATAGAAAACCATTATTTTAAATTGTAATAATATTTCACAATATTACTGTTTTTTTTCTGTATTTTTTATCAAATAAATGCAGGCTTGATGAGTATAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21926 True 344 lncRNA 0.24 1 11992032 11992375

Neighbor

gene id symbol gene type direction distance location
CI01000001_11990189_11991073 AURKAIP1 coding upstream 837 11988077 ~ 11991195 (+)
CI01000001_11898621_11898914 NA coding upstream 91844 11898297 ~ 11900188 (+)
CI01000001_11809724_11812692 LZIC coding upstream 178588 11809427 ~ 11813444 (+)
CI01000001_11756218_11760009 NA coding upstream 230535 11756161 ~ 11761497 (+)
CI01000001_11656975_11660666 TARDBPL, TARDBP coding upstream 330166 11656029 ~ 11661866 (+)
CI01000001_11994138_12003906 NA coding downstream 1763 11994138 ~ 12004100 (+)
CI01000001_12006266_12048809 DVL1A, DVL1B, DVL1 coding downstream 13553 12005928 ~ 12049045 (+)
CI01000001_12058281_12060612 NA coding downstream 65380 12057755 ~ 12061261 (+)
CI01000001_12088244_12091260 NA coding downstream 95792 12088167 ~ 12091494 (+)
CI01000001_12280407_12327837 NA coding downstream 286396 12278771 ~ 12327954 (+)
G19469 NA non-coding upstream 24663 11907617 ~ 11967369 (+)
G19490 NA non-coding upstream 103522 11888104 ~ 11888510 (+)
G19489 NA non-coding upstream 104149 11887468 ~ 11887883 (+)
G19488 NA non-coding upstream 104831 11886948 ~ 11887201 (+)
G19438 NA non-coding upstream 115780 11852354 ~ 11876252 (+)
G19473 NA non-coding downstream 62553 12054928 ~ 12055598 (+)
G19538 NA non-coding downstream 117188 12109563 ~ 12481405 (+)
G19548 NA non-coding downstream 151245 12143620 ~ 12144142 (+)
G19621 NA non-coding downstream 312638 12305013 ~ 12369030 (+)
G19673 NA non-coding downstream 530298 12522673 ~ 12538554 (+)
G19395 NA other upstream 310215 11681322 ~ 11681817 (+)
G19314 NA other upstream 433359 11501194 ~ 11558673 (+)
G19039 NA other upstream 1138049 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 1452186 10538388 ~ 10539846 (+)
G18937 NA other upstream 1515643 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 1521029 13514115 ~ 13517063 (+)

Expression


Co-expression Network