G19548


Basic Information

Item Value
gene id G19548
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 12143620 ~ 12144142 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21967
CAGTGCTTCTGGGTTCTACGTCAGAACGTAAGGTTTTGGAACGACATGAGGGTGAGTAATTAATCAGAGAATTTTTATTTTTGGGTGAACTAACCCTTTAATCATGACCCCGACATTTCATGATATTCATATAAGCATACAGAGTAAAAAAGACAAATAGTGAATGTGGAAAAAAAACCTGACATACTCAACCTTTCAAAAAAAAAAAAACCCACATACATACCAACAGAAGCCAGTACATCCATGACTACCGCACATACACATACACATTCCTCTTTTTCGGTCCCTCCTACGCCGATACATTTGTCCCTGTTTTACAATGCACGTTTGGCAGACTTACAACCCATCCAAATACAAGTAATCTGTGAAGCTGTGCTTCAGTCGTAAATTCAAGAGTGAGCCAGAAGCGTATGACATCTACGGCTCACTCCTTTCTCGCTCTGTCTCTTCAGAGAGCTTTTACGCACCCACACAATCACGCTCGCACCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21967 True 492 lncRNA 0.42 2 12143620 12144142

Neighbor

gene id symbol gene type direction distance location
CI01000001_12088244_12091260 NA coding upstream 52126 12088167 ~ 12091494 (+)
CI01000001_12058281_12060612 NA coding upstream 82359 12057755 ~ 12061261 (+)
CI01000001_12006266_12048809 DVL1A, DVL1B, DVL1 coding upstream 94575 12005928 ~ 12049045 (+)
CI01000001_11994138_12003906 NA coding upstream 139520 11994138 ~ 12004100 (+)
CI01000001_11990189_11991073 AURKAIP1 coding upstream 152425 11988077 ~ 11991195 (+)
CI01000001_12280407_12327837 NA coding downstream 134629 12278771 ~ 12327954 (+)
CI01000001_12486765_12495297 DCJ11, DNAJC11A, DNAJC11 coding downstream 341404 12485546 ~ 12495518 (+)
CI01000001_12503839_12514653 ASXL1 coding downstream 359386 12503528 ~ 12515328 (+)
CI01000001_12556923_12557900 NPBWR2 coding downstream 412041 12556183 ~ 12558099 (+)
CI01000001_12568625_12571184 NA coding downstream 424392 12568534 ~ 12571943 (+)
G19473 NA non-coding upstream 88022 12054928 ~ 12055598 (+)
G19512 NA non-coding upstream 151245 11992032 ~ 11992375 (+)
G19469 NA non-coding upstream 176251 11907617 ~ 11967369 (+)
G19490 NA non-coding upstream 255110 11888104 ~ 11888510 (+)
G19489 NA non-coding upstream 255737 11887468 ~ 11887883 (+)
G19621 NA non-coding downstream 160871 12305013 ~ 12369030 (+)
G19673 NA non-coding downstream 378531 12522673 ~ 12538554 (+)
G19697 NA non-coding downstream 401808 12545950 ~ 12546380 (+)
G19702 NA non-coding downstream 407885 12552027 ~ 12552458 (+)
G19704 NA non-coding downstream 410957 12555099 ~ 12555464 (+)
G19395 NA other upstream 461803 11681322 ~ 11681817 (+)
G19314 NA other upstream 584947 11501194 ~ 11558673 (+)
G19039 NA other upstream 1289637 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 1603774 10538388 ~ 10539846 (+)
G18937 NA other upstream 1667231 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 1369262 13514115 ~ 13517063 (+)

Expression


Co-expression Network