Gene
RNA
| Item | Value |
|---|---|
| gene id | G19792 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 12821606 ~ 12826051 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU22228 | False | 4258 | lncRNA | 0.40 | 2 | 12821606 | 12826051 |
| TU22229 | True | 2830 | lncRNA | 0.43 | 2 | 12821606 | 12826051 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_12814416_12815426 | IRAK1BP1 | coding | upstream | 6162 | 12814336 ~ 12815444 (+) |
| CI01000001_12718151_12726821 | TBX18 | coding | upstream | 94272 | 12717924 ~ 12727334 (+) |
| CI01000001_12657571_12666609 | NA | coding | upstream | 154227 | 12657571 ~ 12667379 (+) |
| CI01000001_12633655_12648702 | NA | coding | upstream | 172490 | 12633198 ~ 12649116 (+) |
| CI01000001_12602382_12613489 | CABLES2A | coding | upstream | 207668 | 12601961 ~ 12613938 (+) |
| CI01000001_12873759_12874041 | NA | coding | downstream | 47708 | 12873448 ~ 12874215 (+) |
| CI01000001_12912442_12919516 | SH3BGRL2 | coding | downstream | 85563 | 12911614 ~ 12919991 (+) |
| CI01000001_12926362_12928572 | RPS12, RGD1561102, RPS12-PS2, RPS12P4, GM4925, RPS12.S | coding | downstream | 99363 | 12925414 ~ 12928579 (+) |
| CI01000001_12991367_12993048 | NA | coding | downstream | 165225 | 12991276 ~ 12993443 (+) |
| CI01000001_13002416_13005974 | NA | coding | downstream | 176163 | 13002214 ~ 13006033 (+) |
| G19783 | NA | non-coding | upstream | 10895 | 12799634 ~ 12810711 (+) |
| G19756 | NA | non-coding | upstream | 75298 | 12745990 ~ 12746308 (+) |
| G19718 | NA | non-coding | upstream | 243681 | 12577514 ~ 12577925 (+) |
| G19717 | NA | non-coding | upstream | 244187 | 12577205 ~ 12577419 (+) |
| G19704 | NA | non-coding | upstream | 266142 | 12555099 ~ 12555464 (+) |
| G19796 | NA | non-coding | downstream | 5857 | 12831908 ~ 12835161 (+) |
| G19769 | NA | non-coding | downstream | 48759 | 12874810 ~ 12877091 (+) |
| G19813 | NA | non-coding | downstream | 57732 | 12883783 ~ 12883989 (+) |
| G19758 | NA | non-coding | downstream | 94954 | 12921005 ~ 12924201 (+) |
| G19825 | NA | non-coding | downstream | 103761 | 12929812 ~ 12930207 (+) |
| G19395 | NA | other | upstream | 1139789 | 11681322 ~ 11681817 (+) |
| G19314 | NA | other | upstream | 1262933 | 11501194 ~ 11558673 (+) |
| G19039 | NA | other | upstream | 1967623 | 10850924 ~ 10853983 (+) |
| CI01000001_10538498_10539667 | RPS26 | other | upstream | 2281760 | 10538388 ~ 10539846 (+) |
| G18937 | NA | other | upstream | 2345217 | 10474984 ~ 10476389 (+) |
| CI01000001_13514115_13517063 | NA | other | downstream | 687353 | 13514115 ~ 13517063 (+) |
