G19885


Basic Information

Item Value
gene id G19885
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 12990593 ~ 12991125 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU22331
AAAAAAGTGCAAATCAACACATCATGCAGGTTATCAGTTTGGCAGCACTTTGGATTTATTTAAAATGTAGGCAATTAATCTTTTTCTTTTTAAAACTTTTAGGAAAGTTTTAGTGGGTTGAATTTTTAGTGGGTTGAATTTTTAAAGTACATATATAGGCTTGAATCAGCATCTGTAGTGAAACAAAATCCTACATTTGTATTTGTGCCTTCTTTGCTCTGCATGTGCACTTGGTCCTAATCCAGCCTGAAAAATGAAAGCATATTGCTACAGTGTTGTTTTTCACGTCTCTGATGTAACCTAACCTACAGGACTGAGAGTGATTGAGCTCTTCGGTCGCTGTTCAGTGTCTAGGTGCTGAAACCTATTGTGCCATGATTGATGCAGCTTCTCCCACACTGTAAGACAACATTGCTCAAAAAAGAGCGTTTTAAAAGGTCTTGGTCATTTAGTTTCTGTATTTTATGTCTAGCATGAATAAACTTGTTAAGCCATTGAAAAAACGTTTTGAGTGAAGGGTGACATACCAAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22331 True 533 lncRNA 0.36 1 12990593 12991125

Neighbor

gene id symbol gene type direction distance location
CI01000001_12926362_12928572 RPS12, RGD1561102, RPS12-PS2, RPS12P4, GM4925, RPS12.S coding upstream 62014 12925414 ~ 12928579 (+)
CI01000001_12912442_12919516 SH3BGRL2 coding upstream 70602 12911614 ~ 12919991 (+)
CI01000001_12873759_12874041 NA coding upstream 116504 12873448 ~ 12874215 (+)
CI01000001_12814416_12815426 IRAK1BP1 coding upstream 175149 12814336 ~ 12815444 (+)
CI01000001_12718151_12726821 TBX18 coding upstream 263259 12717924 ~ 12727334 (+)
CI01000001_12991367_12993048 NA coding downstream 151 12991276 ~ 12993443 (+)
CI01000001_13002416_13005974 NA coding downstream 11089 13002214 ~ 13006033 (+)
CI01000001_13011184_13014251 TBPL1 coding downstream 18294 13009419 ~ 13014262 (+)
CI01000001_13160253_13167224 MYB coding downstream 169128 13160253 ~ 13168505 (+)
CI01000001_13220895_13223877 ARMC1L coding downstream 229770 13220895 ~ 13224370 (+)
G19910 NA non-coding upstream 671 12988183 ~ 12989922 (+)
G19826 NA non-coding upstream 48289 12935747 ~ 12942304 (+)
G19825 NA non-coding upstream 60386 12929812 ~ 12930207 (+)
G19758 NA non-coding upstream 66392 12921005 ~ 12924201 (+)
G19813 NA non-coding upstream 106604 12883783 ~ 12883989 (+)
G19923 NA non-coding downstream 76923 13068048 ~ 13068268 (+)
G19924 NA non-coding downstream 77647 13068772 ~ 13069012 (+)
G19932 NA non-coding downstream 95196 13086321 ~ 13086557 (+)
G19935 NA non-coding downstream 100047 13091172 ~ 13091432 (+)
G19846 NA non-coding downstream 100719 13091844 ~ 13104246 (+)
G19395 NA other upstream 1308776 11681322 ~ 11681817 (+)
G19314 NA other upstream 1431920 11501194 ~ 11558673 (+)
G19039 NA other upstream 2136610 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2450747 10538388 ~ 10539846 (+)
G18937 NA other upstream 2514204 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 522279 13514115 ~ 13517063 (+)

Expression


Co-expression Network