Gene
RNA
| Item | Value |
|---|---|
| gene id | G19963 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 13198160 ~ 13198366 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU22423 | True | 207 | lncRNA | 0.49 | 1 | 13198160 | 13198366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_13160253_13167224 | MYB | coding | upstream | 29655 | 13160253 ~ 13168505 (+) |
| CI01000001_13011184_13014251 | TBPL1 | coding | upstream | 183898 | 13009419 ~ 13014262 (+) |
| CI01000001_13002416_13005974 | NA | coding | upstream | 192127 | 13002214 ~ 13006033 (+) |
| CI01000001_12991367_12993048 | NA | coding | upstream | 204717 | 12991276 ~ 12993443 (+) |
| CI01000001_12926362_12928572 | RPS12, RGD1561102, RPS12-PS2, RPS12P4, GM4925, RPS12.S | coding | upstream | 269581 | 12925414 ~ 12928579 (+) |
| CI01000001_13220895_13223877 | ARMC1L | coding | downstream | 22529 | 13220895 ~ 13224370 (+) |
| CI01000001_13235608_13240350 | NA | coding | downstream | 37242 | 13235608 ~ 13240441 (+) |
| CI01000001_13242387_13245977 | NEMP1 | coding | downstream | 44021 | 13242387 ~ 13246245 (+) |
| CI01000001_13266612_13285039 | PAN2 | coding | downstream | 68177 | 13266543 ~ 13285293 (+) |
| CI01000001_13290327_13291466 | PLAGX | coding | downstream | 91241 | 13289607 ~ 13293479 (+) |
| G19952 | NA | non-coding | upstream | 26741 | 13171081 ~ 13171419 (+) |
| G19846 | NA | non-coding | upstream | 93914 | 13091844 ~ 13104246 (+) |
| G19935 | NA | non-coding | upstream | 106728 | 13091172 ~ 13091432 (+) |
| G19932 | NA | non-coding | upstream | 111603 | 13086321 ~ 13086557 (+) |
| G19924 | NA | non-coding | upstream | 129148 | 13068772 ~ 13069012 (+) |
| G19964 | NA | non-coding | downstream | 10 | 13198376 ~ 13198666 (+) |
| G19965 | NA | non-coding | downstream | 314 | 13198680 ~ 13199056 (+) |
| G19967 | NA | non-coding | downstream | 1633 | 13199999 ~ 13200235 (+) |
| G19968 | NA | non-coding | downstream | 2213 | 13200579 ~ 13200795 (+) |
| G19969 | NA | non-coding | downstream | 2736 | 13201102 ~ 13201305 (+) |
| G19395 | NA | other | upstream | 1516343 | 11681322 ~ 11681817 (+) |
| G19314 | NA | other | upstream | 1639487 | 11501194 ~ 11558673 (+) |
| G19039 | NA | other | upstream | 2344177 | 10850924 ~ 10853983 (+) |
| CI01000001_10538498_10539667 | RPS26 | other | upstream | 2658314 | 10538388 ~ 10539846 (+) |
| G18937 | NA | other | upstream | 2721771 | 10474984 ~ 10476389 (+) |
| CI01000001_13514115_13517063 | NA | other | downstream | 315038 | 13514115 ~ 13517063 (+) |
