CI01000002_00407685_00411542


Basic Information

Item Value
gene id CI01000002_00407685_00411542
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 407477 ~ 411922 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000002_00407685_00411542.mRNA
GTATAAAATGACTTGGCCATGATTAATTATATTGTCTGTTACATATGAAGATCTCAAGTATGAAGGAGCACAACATTCAGTACAGAGAAATATATGTCTCTTCCATAGTTGTGAGATTGTCTGACTAACAGTTTGAAGCTGGGCTACAAGTTCTGCAGTCACAGGCCATTCTACTGTAACCACAATTCCACTGCATGGCTGGTCAGCGATGATGGTTGTTTTCTTTTCTTTTAAACTAGATAAATGTTTATGGCCAAATGATAAATATAAGTGCAATACATCAGGTCATGTGGAAAGACTGTGGAGATCTACAGCAGATGAGCATTGCAGTCCAGTGGAAAGACTGGACAACCGGTCTCGCCCCCTTTGTAGCCTGTTCCATGGCCATCTCATCCATGGAAGCACCTTCAACTGGACATTTGTGGGGAAATTCATGGCCATGGCATTCCCCACCATCAGCGCTTTCTGGTGGTCGTGTATGATCTCCATTTTAAATGGCCCGAGAGATGGAATTGCCATTGGACAGACTCAGACCACAACCTGGGCAGCAGCCAAAGCTGCCGTAAGTTCAAACCAGAGGCGAATGAAGGACAACTTTGACAGAAGATACAAGGCCAAACCTAGTAAGATAACAGTTCTAGACTGGGTTCGGGTCCAGAGACAAACAAAATGGCATCGTTTTGGTCTAAACCCCTCCAGGTGGATTGCAAGGGAGCCTAGTGGAGGACCAACACACAGCACGTCTTTTGCACCACCATCACCGAGGCCAGTTCCACCATGGACAGGCCGGGTGCTTCAAGGATCCTCTGTCAGGGTGGTCCCGCAACAATCTCCACCAGCTGTGGGGCCTCAACCTCTTCAGCCACTGCTTGATGAGAATCAGGAGGGCCAGGATGAGCTTCTCATTCAATGAGCTTCTCATTCAACTTGTCTCAGCACTGAAGAGTGACGGACAATGTGAGCTTCACTGACTTCACTCCTATTGGTTGTCACTCCCAAAAATTGCTCTTTATTTGCATAAAGTTGAACAGATCTCATTTTTGTCGGGTCTTTGGACATGCCCCATCCGGTCGCCAAGGGTCACTTGTGTCGCACTTGCGTATTATTACTGTAACTGCAAGATGTTGTAATCAAGTAAATTGTGAAGGCATTTGGATAGTATTATAATACAATTCTCATAATTTTGACTTCAGTACAAGAAAATTAGGGTATTTGGCTTTTCAAAACCAGTAGATTGGATGATCAAGTGAAAGTCTAACTTTGTGTTAGTTATTTGAATGCAAATAATCCAGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106565488

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000002_00407685_00411542.mRNA True 1293 mRNA 0.44 5 407477 411922

Neighbor

gene id symbol gene type direction distance location
CI01000002_00401987_00402742 NA coding upstream 4700 400991 ~ 402777 (+)
CI01000002_00066136_00130168 BMP7, BMP7.1, BMP7B, BMP7.1.L coding upstream 277309 66136 ~ 130168 (+)
CI01000002_00021260_00021739 NA coding upstream 385626 21260 ~ 21851 (+)
CI01000002_00470438_00473433 NA coding downstream 58516 470438 ~ 474568 (+)
CI01000002_00699406_00707935 CSRP1, CSRP1A, CSRP1B coding downstream 287135 699057 ~ 708305 (+)
CI01000002_00718489_00718872 PHLDA3 coding downstream 306300 718222 ~ 719501 (+)
CI01000002_00738127_00744469 TNNI1A, TNNI1B, TNNI1 coding downstream 326205 738127 ~ 744755 (+)
CI01000002_00772164_00786566 TNNT2, TNNT2A coding downstream 360242 772164 ~ 786566 (+)
G21101 NA non-coding upstream 128 404508 ~ 407349 (+)
G21045 NA non-coding upstream 27298 319605 ~ 380179 (+)
G21017 NA non-coding upstream 35976 298783 ~ 371501 (+)
G21056 NA non-coding upstream 65090 341335 ~ 342387 (+)
G21117 NA non-coding downstream 27831 439753 ~ 440376 (+)
G21238 NA non-coding downstream 50146 462068 ~ 462324 (+)
G21240 NA non-coding downstream 52194 464116 ~ 464324 (+)
G21243 NA non-coding downstream 56310 468232 ~ 468435 (+)
G21251 NA non-coding downstream 64725 476647 ~ 476857 (+)
G21239 NA other downstream 51633 463555 ~ 463916 (+)
G21254 NA other downstream 67225 479147 ~ 480455 (+)
G21272 NA other downstream 111085 523007 ~ 525797 (+)
G21930 NA other downstream 975692 1387614 ~ 1409057 (+)

Expression


Co-expression Network