CI01000002_00470438_00473433


Basic Information

Item Value
gene id CI01000002_00470438_00473433
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 470438 ~ 474568 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000002_00470438_00473433.mRNA
ATGGACATAAAATTGTTCTACGGAAGTAAAGAGCAGGATCCATGTGTTAGGCAAATCCCATCTGACAGTGAGGACAGTGAGATAGACGGCAGTGACAATGAGGAGGAGTGGAATGGAGAAAAAGGTTTGAGCAGAAGTGAAAAAATAAGTTCTGACAGCAGCTCTGCCGATGAAATTCTGACTCCGTACCAATATTTCAAAAGTCTTCTCTCCGATGACCTTTTTGAGCTTATTGTTAATGAGTCAAACCTGTACAGCATCCAGTGCGATCCTACCAAGCCGCTTAAACTTACTGTTCAAGAACTTGAACAGTTCTTTGGCACTGTGCTCCACATGTCTTTATTTGGTCTTCCAGCCACCCGCATGTTTTGGAGCCACAGTAGTCGCATTGCACATGTTGCTGATGTGATGCCTCTTGCAAGATGGGAGGCCATCAAAAGATTTCTCCATTTCAGTGACAACAGTTTTCAGCCCACAAGAGATATGGCTGACTACGATGAGTTATACAAGATTCGGCCTCTCCTAAATCACATCCTTACCAAGCTGAAACAACTTCCTATGCGTGAGATGTTGAGTGTGGATGAACAAATGGTGCCATTTAAAGGCAAGAGCAGAATCAAGCAGTACCTACCCAGTAAACCAAGAAAATGGGGTTACAGAATACTGGTCCTTGCTGGATCAGATGGTGTTCCACACAATTTTGAAGTTTATACTGGGAAAATTGTCCATCCACCTGAGCTTCCAGATATAGGCGCAAGTGGGAATGTAGTACTGCGCCTGGCAGAACCAATACCGAAGAATAGGAATTTCAAGCTGTCCTTTAACAACTGGTTTAGCTCAATCCCACTGATGCTCGAGCTGTCCCAGCAAGGTATCCACTGTCTGGGTACGGTGCGCTCTAATCGCTTGCCAGGAAGTTCCATGATGCCAGACGCTGATCTGAAAAGATCTGGCCGTGGGTCCTTCCAGGAAAAAACGGCCTATGTTGGAGATACCCAGCTGCATGCTGTCAAATGGTTTGACAACAGGCCAGTCACCCTCCTCAGTAGCTACGTAGGTGCTCACCCTGTATCCCATGTCGACAAATGGCACAGAGGCCAAAAGAAAACCATCAAGGTCCCATGCCCTGCAGCAGTATCCACATACAATCAGCACAAGGGAGGTGTCGACTTGTTGGATTCACTGATTGCTTTGTATCGCACCAACATCAGGTCAAAGAAATGGTACCACCGCCTTGTCTTTCATTTCATAGATATGGCAGTGGTGACATGTTGGCTCATCTACAGACGGAATTGTGCTGACAATGGAAAGATGAGAAGTGACCACATGCGCCTTTATGCCTTCAAGTCCCAAATTGCACACAGTCTGTGCAAATCCAACAAAGATACCAGGAAGAGAGGGCGAACCAGTGATTCGTGTGGTAGCCATGCGGATCAGTATCTGTACAGAAGTGAACTTGAGCTGGAAAATAAAGGGAAAAAAGTTTAATGGAGAACTAGAATGTGGCCTAACTCTGAGAGAGCTGGATGGGCTTCCAGTGGATTTTCTGAAAACTTTCTGGTCGGAGATAGGAGTTGACCTGCTAGAGGTGTTCAATGACAGCTTGCTGAAGGGTGGGTTGCCGTTGAGCTGCCGAAGAGCAGTGATTACTCTTCTTCTGAAAAGCAGTTTTCAGAGATCTCACTGAAATTAAGAACTGGAAGCCGGTATCACTTCTGTGCAGTGGTTATAAATTACTTTCTAAAACATTGACTAAAAGATTGACTAAAATAATGGGACATGTGATCCATCCAGATCAATCTTATTGTGTACCTAGCAGGTCAATCTTTGAGAATATTTTTTTAATTAGAGATATTATTACAGGTTTCTAAATTGTTTAATATCAATTGTGGTTTGTTGTCTCTAGACCAAGAGAAAGCTTTTGATCGTGTTGAACATGCTTATCTATGGAATGTTCTAGAAGTTTTTGGTTTTAATGAGAAGTTTTGGGTGTGGCGCGGCATGTAAATCTCACTGGCCAATTCCCATTGGCTCGTTTTGTACCACTTGGAGGTTGGGCTCCCAAGTGAGTCAGTATCGACGTTACGTCTCCATTCCCTCCTTCAGGGAACAGGGGTTACAATAGTAACCTAGACGTTTCAGTTTTGGATTCTAAGAATAACTCAGACTGTCCTTTTTGTTCTCAATGCTTTTATGTAATGTTTCAGGCTTAAACCTATGTTTGCAATGGTGCAAGGATTGTGTTTTAACAAATGTTTTTATCCTGAAACATTTATTTTTGTTTTTAAATATGTGCAACAAAAAGTGTGTTAAGTTTCAAAATTGATTTTTATTATTGGGCAAGCCAAACTGGCAATCTACATGAGTAGGAAAAGTAAAATAGAGCAAAGGGGCAATGATGATGTTATTGTTGTTTTTAAGTCTTTATTTAATACAAGAATTTTGATTGACTTTAGATTTTACAAAGCTATGAGTGATCTTTCTATTTTTGATTTGAAATGGTGTAGTTGTAATGTTTTGTGTACAATTGTTGATGATGAATTATTATTATTTTTTTAATTTTATGTTTTTTTAAATAAATTGTGGTGTGATTTTGTAAAATAATGTATTTTGGTTATTTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000002_00470438_00473433.mRNA True 2623 mRNA 0.41 3 470438 474568

Neighbor

gene id symbol gene type direction distance location
CI01000002_00407685_00411542 NA coding upstream 58516 407477 ~ 411922 (+)
CI01000002_00401987_00402742 NA coding upstream 67661 400991 ~ 402777 (+)
CI01000002_00066136_00130168 BMP7, BMP7.1, BMP7B, BMP7.1.L coding upstream 340270 66136 ~ 130168 (+)
CI01000002_00021260_00021739 NA coding upstream 448587 21260 ~ 21851 (+)
CI01000002_00699406_00707935 CSRP1, CSRP1A, CSRP1B coding downstream 224489 699057 ~ 708305 (+)
CI01000002_00718489_00718872 PHLDA3 coding downstream 243654 718222 ~ 719501 (+)
CI01000002_00738127_00744469 TNNI1A, TNNI1B, TNNI1 coding downstream 263559 738127 ~ 744755 (+)
CI01000002_00772164_00786566 TNNT2, TNNT2A coding downstream 297596 772164 ~ 786566 (+)
CI01000002_01017365_01040978 NA coding downstream 542621 1017189 ~ 1041687 (+)
G21243 NA non-coding upstream 2003 468232 ~ 468435 (+)
G21240 NA non-coding upstream 6114 464116 ~ 464324 (+)
G21238 NA non-coding upstream 8114 462068 ~ 462324 (+)
G21117 NA non-coding upstream 30062 439753 ~ 440376 (+)
G21101 NA non-coding upstream 63089 404508 ~ 407349 (+)
G21251 NA non-coding downstream 2079 476647 ~ 476857 (+)
G21265 NA non-coding downstream 31728 506296 ~ 510897 (+)
G21258 NA non-coding downstream 36874 511442 ~ 516383 (+)
G21269 NA non-coding downstream 120469 595037 ~ 624319 (+)
G21372 NA non-coding downstream 202986 677554 ~ 677767 (+)
G21239 NA other upstream 6522 463555 ~ 463916 (+)
G21254 NA other downstream 4579 479147 ~ 480455 (+)
G21272 NA other downstream 48439 523007 ~ 525797 (+)
G21930 NA other downstream 913046 1387614 ~ 1409057 (+)

Expression


Co-expression Network