Item | Value |
---|---|
gene id | G20932 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000002 |
NCBI id | null |
chromosome length | 1907571 |
location | 70489 ~ 110166 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU23526 | True | 710 | lncRNA | 0.37 | 2 | 70489 | 110166 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000002_00021260_00021739 | NA | coding | upstream | 48638 | 21260 ~ 21851 (+) |
CI01000002_00401987_00402742 | NA | coding | downstream | 290825 | 400991 ~ 402777 (+) |
CI01000002_00407685_00411542 | NA | coding | downstream | 297311 | 407477 ~ 411922 (+) |
CI01000002_00470438_00473433 | NA | coding | downstream | 360272 | 470438 ~ 474568 (+) |
CI01000002_00699406_00707935 | CSRP1, CSRP1A, CSRP1B | coding | downstream | 588891 | 699057 ~ 708305 (+) |
CI01000002_00718489_00718872 | PHLDA3 | coding | downstream | 608056 | 718222 ~ 719501 (+) |
G21017 | NA | non-coding | downstream | 188617 | 298783 ~ 371501 (+) |
G21045 | NA | non-coding | downstream | 209439 | 319605 ~ 380179 (+) |
G21056 | NA | non-coding | downstream | 231169 | 341335 ~ 342387 (+) |
G21101 | NA | non-coding | downstream | 294342 | 404508 ~ 407349 (+) |
G21239 | NA | other | downstream | 353389 | 463555 ~ 463916 (+) |
G21254 | NA | other | downstream | 368981 | 479147 ~ 480455 (+) |
G21272 | NA | other | downstream | 412841 | 523007 ~ 525797 (+) |
G21930 | NA | other | downstream | 1277448 | 1387614 ~ 1409057 (+) |